RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
SPEN-205ENST00000487496 SLC39A5Q6ZMH5 540 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
SPEN-205ENST00000487496 RBM8AQ9Y5S9 174 aaKnown RBP13.4□□□□□ -0.26
SPEN-205ENST00000487496 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 ASB14A6NK59 587 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 ADCY6O43306 1168 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 ADAMTS4O75173 837 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
SPEN-205ENST00000487496 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
SPEN-205ENST00000487496 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 BMP2KLQ5H9B9 411 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 KIAA1211Q6ZU35 1233 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 RALYLQ86SE5 291 aaKnown RBP13.39□□□□□ -0.27
SPEN-205ENST00000487496 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 NCOA7Q8NI08 942 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 GDF15Q99988 308 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
SPEN-205ENST00000487496 PHF24Q9UPV7 400 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
SPEN-205ENST00000487496 SYNRGQ9UMZ2 1314 aa13.39□□□□□ -0.27
SPEN-205ENST00000487496 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 IFIT3O14879 490 aaKnown RBP13.38□□□□□ -0.27
SPEN-205ENST00000487496 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPEN-205ENST00000487496 RTP1P59025 263 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 SNX17Q15036 470 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 CDC37Q16543 378 aaPredicted RBP13.38□□□□□ -0.27
SPEN-205ENST00000487496 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
SPEN-205ENST00000487496 PTPDC1A2A3K4 754 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 CALML3P27482 149 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 BMP8BP34820 402 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
SPEN-205ENST00000487496 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
SPEN-205ENST00000487496 USH1GQ495M9 461 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 CCSAPQ6IQ19 270 aaPredicted RBP13.37□□□□□ -0.27
SPEN-205ENST00000487496 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 RNF207Q6ZRF8 634 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 TSEN34Q9BSV6 310 aaKnown RBP13.37□□□□□ -0.27
SPEN-205ENST00000487496 JMJD4Q9H9V9 463 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 SENP2Q9HC62 589 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 ADD3Q9UEY8 706 aaKnown RBP13.37□□□□□ -0.27
SPEN-205ENST00000487496 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
SPEN-205ENST00000487496 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 A0A1W2PPC1 479 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 A0A1W2PQ45 241 aaPredicted RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 A0A1W2PQY0 241 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 ERICH2A1L162 156 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 DHX16O60231 1041 aaKnown RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 ALDH5A1P51649 535 aaPredicted RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 ACLYP53396 1101 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 GJA9P57773 515 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 ANTXR2P58335 489 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 TNFAIP2Q03169 654 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 KCNA10Q16322 511 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 MB21D2Q8IYB1 491 aaPredicted RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
SPEN-205ENST00000487496 SPC25Q9HBM1 224 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 MCM3APO60318 1980 aa13.36□□□□□ -0.27
SPEN-205ENST00000487496 LOC102724159A0A0B4J2E5 919 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 MOXD2PA6NHM9 499 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
SPEN-205ENST00000487496 NKX3-2P78367 333 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 TROAPQ12815 778 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 WTAPQ15007 396 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 PWP2Q15269 919 aaKnown RBP13.35□□□□□ -0.27
SPEN-205ENST00000487496 TMEM67Q5HYA8 995 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
SPEN-205ENST00000487496 RGS22Q8NE09 1264 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 TBC1D5Q92609 795 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 MAF1Q9H063 256 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 VTA1Q9NP79 307 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 PDGFCQ9NRA1 345 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
SPEN-205ENST00000487496 ABCB11O95342 1321 aa13.35□□□□□ -0.27
SPEN-205ENST00000487496 SLC27A2O14975 620 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 CTAGE5O15320 804 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms