RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MOXD2PA6NHM9 499 aa22.39■■□□□ 1.17
CLIP2-206ENST00000487091 CHMLP26374 656 aa22.39■■□□□ 1.17
CLIP2-206ENST00000487091 CST5P28325 142 aaPredicted RBP22.39■■□□□ 1.17
CLIP2-206ENST00000487091 MDM2Q00987 491 aaPredicted RBP22.39■■□□□ 1.17
CLIP2-206ENST00000487091 CCSAPQ6IQ19 270 aaPredicted RBP22.39■■□□□ 1.17
CLIP2-206ENST00000487091 NSMFQ6X4W1 530 aa22.39■■□□□ 1.17
CLIP2-206ENST00000487091 PNMA1Q8ND90 353 aa22.39■■□□□ 1.17
CLIP2-206ENST00000487091 KAT14Q9H8E8 782 aa22.39■■□□□ 1.17
CLIP2-206ENST00000487091 SPC25Q9HBM1 224 aa22.39■■□□□ 1.17
CLIP2-206ENST00000487091 A0A1W2PQ45 241 aaPredicted RBP22.38■■□□□ 1.17
CLIP2-206ENST00000487091 A0A1W2PQY0 241 aa22.38■■□□□ 1.17
CLIP2-206ENST00000487091 ACLYP53396 1101 aa22.38■■□□□ 1.17
CLIP2-206ENST00000487091 GJA9P57773 515 aa22.38■■□□□ 1.17
CLIP2-206ENST00000487091 LRIT3Q3SXY7 679 aa22.38■■□□□ 1.17
CLIP2-206ENST00000487091 NUP133Q8WUM0 1156 aa22.38■■□□□ 1.17
CLIP2-206ENST00000487091 UPF3AQ9H1J1 476 aaKnown RBP22.38■■□□□ 1.17
CLIP2-206ENST00000487091 ASTN1O14525 1302 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 WDR19Q8NEZ3 1342 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 LOC102724159A0A0B4J2E5 919 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 ADCY6O43306 1168 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 NKX3-2P78367 333 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 BAATQ14032 418 aaPredicted RBP22.37■■□□□ 1.17
CLIP2-206ENST00000487091 PWP2Q15269 919 aaKnown RBP22.37■■□□□ 1.17
CLIP2-206ENST00000487091 KCNA10Q16322 511 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 ENAHQ8N8S7 591 aaPredicted RBP22.37■■□□□ 1.17
CLIP2-206ENST00000487091 PCSK9Q8NBP7 692 aaKnown RBP22.37■■□□□ 1.17
CLIP2-206ENST00000487091 SZT2Q5T011 3432 aa22.37■■□□□ 1.17
CLIP2-206ENST00000487091 LAMA3Q16787 3333 aa22.36■■□□□ 1.17
CLIP2-206ENST00000487091 TNKSO95271 1327 aa22.36■■□□□ 1.17
CLIP2-206ENST00000487091 SOX1O00570 391 aaPredicted RBP22.36■■□□□ 1.17
CLIP2-206ENST00000487091 TLE2Q04725 743 aa22.36■■□□□ 1.17
CLIP2-206ENST00000487091 MORC4Q8TE76 937 aa22.36■■□□□ 1.17
CLIP2-206ENST00000487091 CLEC4DQ8WXI8 215 aa22.36■■□□□ 1.17
CLIP2-206ENST00000487091 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
CLIP2-206ENST00000487091 ADD3Q9UEY8 706 aaKnown RBP22.36■■□□□ 1.17
CLIP2-206ENST00000487091 NFIBO00712 420 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 C6orf222P0C671 652 aaPredicted RBP22.35■■□□□ 1.17
CLIP2-206ENST00000487091 GOLGA8HP0CJ92 632 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 TNFAIP2Q03169 654 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 ASPRV1Q53RT3 343 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 UBA5Q9GZZ9 404 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 PDLIM7Q9NR12 457 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
CLIP2-206ENST00000487091 LCTP09848 1927 aa22.35■■□□□ 1.17
CLIP2-206ENST00000487091 ELP1O95163 1332 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 MYADML2A6NDP7 307 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 IQSEC1Q6DN90 963 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 GPR153Q6NV75 609 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 TOX2Q96NM4 488 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 VTA1Q9NP79 307 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 PRDM5Q9NQX1 630 aaPredicted RBP22.34■■□□□ 1.17
CLIP2-206ENST00000487091 GNEQ9Y223 722 aaKnown RBP22.34■■□□□ 1.17
CLIP2-206ENST00000487091 LTBP2Q14767 1821 aa22.34■■□□□ 1.17
CLIP2-206ENST00000487091 PTPDC1A2A3K4 754 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 SGSM2O43147 1006 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 ASGR1P07306 291 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 ALDH5A1P51649 535 aaPredicted RBP22.33■■□□□ 1.17
CLIP2-206ENST00000487091 PTH1RQ03431 593 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 TRDNQ13061 729 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 GNASQ5JWF2 1037 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 TAPT1Q6NXT6 567 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 RNF207Q6ZRF8 634 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 ANKRD33Q7Z3H0 272 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 LRCH3Q96II8 777 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 GLT1D1Q96MS3 346 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 PURBQ96QR8 312 aaKnown RBP22.33■■□□□ 1.17
CLIP2-206ENST00000487091 MAF1Q9H063 256 aa22.33■■□□□ 1.17
CLIP2-206ENST00000487091 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.32■■□□□ 1.16
CLIP2-206ENST00000487091 TRIM43BA6NCK2 446 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 CTAGE5O15320 804 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 CYP21A2P08686 494 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 CLTBP09497 229 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 PARP1P09874 1014 aaKnown RBP22.32■■□□□ 1.16
CLIP2-206ENST00000487091 IRX5P78411 483 aaPredicted RBP22.32■■□□□ 1.16
CLIP2-206ENST00000487091 SEC23AQ15436 765 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 IFIT1BQ5T764 474 aaKnown RBP22.32■■□□□ 1.16
CLIP2-206ENST00000487091 NOL8Q76FK4 1167 aaKnown RBP22.32■■□□□ 1.16
CLIP2-206ENST00000487091 SH3RF1Q7Z6J0 888 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 RGS22Q8NE09 1264 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 TRIM43Q96BQ3 446 aaPredicted RBP22.32■■□□□ 1.16
CLIP2-206ENST00000487091 Q9Y3F1 56 aa22.32■■□□□ 1.16
CLIP2-206ENST00000487091 LRRC37A2A6NM11 1700 aa22.31■■□□□ 1.16
CLIP2-206ENST00000487091 CYB5R4Q7L1T6 521 aa22.31■■□□□ 1.16
CLIP2-206ENST00000487091 ADGRF4Q8IZF3 695 aa22.31■■□□□ 1.16
CLIP2-206ENST00000487091 CPVLQ9H3G5 476 aa22.31■■□□□ 1.16
CLIP2-206ENST00000487091 PDGFCQ9NRA1 345 aa22.31■■□□□ 1.16
CLIP2-206ENST00000487091 DDX49Q9Y6V7 483 aaKnown RBP22.31■■□□□ 1.16
CLIP2-206ENST00000487091 KIAA0355O15063 1070 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 PQBP1O60828 265 aaKnown RBP22.3■■□□□ 1.16
CLIP2-206ENST00000487091 SMPD1P17405 629 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 CALML3P27482 149 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 RPS6P62753 249 aaKnown RBP22.3■■□□□ 1.16
CLIP2-206ENST00000487091 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-206ENST00000487091 SLC30A10Q6XR72 485 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 EEPD1Q7L9B9 569 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 TLK2Q86UE8 772 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 FBXO16Q8IX29 292 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-206ENST00000487091 DNERQ8NFT8 737 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 BADQ92934 168 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms