RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SLC17A8Q8NDX2 589 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 PRO3102Q9H379 93 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 DLL1O00548 723 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
NEK4-204ENST00000487068 FARP2O94887 1054 aaPredicted RBP11.89□□□□□ -0.51
NEK4-204ENST00000487068 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 STAG2Q8N3U4 1231 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
NEK4-204ENST00000487068 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 SENP2Q9HC62 589 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 A1CFQ9NQ94 594 aaKnown RBP11.89□□□□□ -0.51
NEK4-204ENST00000487068 PAK6Q9NQU5 681 aaPredicted RBP11.89□□□□□ -0.51
NEK4-204ENST00000487068 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 CNPY2Q9Y2B0 182 aa11.89□□□□□ -0.51
NEK4-204ENST00000487068 A0A1W2PPC1 479 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 DDAH1O94760 285 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 SGPL1O95470 568 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 KIF5BP33176 963 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 GRM4Q14833 912 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 MAP3K21Q5TCX8 1036 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 RAB11FIP4Q86YS3 637 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 CCDC144CPQ8IYA2 1237 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 TMTC2Q8N394 836 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 PIBF1Q8WXW3 757 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
NEK4-204ENST00000487068 ZHX1Q9UKY1 873 aaPredicted RBP11.88□□□□□ -0.51
NEK4-204ENST00000487068 SLC12A7Q9Y666 1083 aa11.88□□□□□ -0.51
NEK4-204ENST00000487068 WDR19Q8NEZ3 1342 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 NFIBO00712 420 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 MSCO60682 206 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 HMGB1P09429 215 aaKnown RBP11.87□□□□□ -0.51
NEK4-204ENST00000487068 CALM1P0DP23 149 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CALM2P0DP24 149 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CALM3P0DP25 149 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CYBAP13498 195 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 RXRAP19793 462 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CALML3P27482 149 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 HSPA4P34932 840 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 ADCK5Q3MIX3 580 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 FBXO11Q86XK2 927 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 IGDCC4Q8TDY8 1250 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 MTA3Q9BTC8 594 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 MAD2L2Q9UI95 211 aa11.87□□□□□ -0.51
NEK4-204ENST00000487068 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
NEK4-204ENST00000487068 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
NEK4-204ENST00000487068 ABCB11O95342 1321 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 EVI5O60447 810 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 CPA1P15085 419 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 CASTP20810 708 aaKnown RBP11.86□□□□□ -0.51
NEK4-204ENST00000487068 PRAMEF19Q5SWL8 479 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 SLC30A10Q6XR72 485 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
NEK4-204ENST00000487068 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 SEC63Q9UGP8 760 aaKnown RBP11.86□□□□□ -0.51
NEK4-204ENST00000487068 DDX20Q9UHI6 824 aaKnown RBP11.86□□□□□ -0.51
NEK4-204ENST00000487068 SNX14Q9Y5W7 946 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
NEK4-204ENST00000487068 DNAJC25-GNG10A0A024R161 153 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
NEK4-204ENST00000487068 ZBTB5O15062 677 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 CAPN2P17655 700 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 PSMA5P28066 241 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 LIFRP42702 1097 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 TROAPQ12815 778 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 BAATQ14032 418 aaPredicted RBP11.85□□□□□ -0.51
NEK4-204ENST00000487068 COL9A3Q14050 684 aaPredicted RBP11.85□□□□□ -0.51
NEK4-204ENST00000487068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
NEK4-204ENST00000487068 ARMCX2Q7L311 632 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 PIGSQ96S52 555 aa11.85□□□□□ -0.51
NEK4-204ENST00000487068 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
NEK4-204ENST00000487068 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.85□□□□□ -0.51
NEK4-204ENST00000487068 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
NEK4-204ENST00000487068 ASB14A6NK59 587 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms