RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ACACBO00763 2458 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 NCOR2Q9Y618 2525 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 DDX11L8A8MPP1 907 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 K7ENM7 598 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 CPLX1O14810 134 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 IPO8O15397 1037 aaKnown RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 KATNA1O75449 491 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 NAT2P11245 290 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 EIF4BP23588 611 aaKnown RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 HMGB2P26583 209 aaKnown RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 BMP8BP34820 402 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 RENBPP51606 427 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 TMED1Q13445 227 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 NAA30Q147X3 362 aaPredicted RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 MAP7D1Q3KQU3 841 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 PRPF40BQ6NWY9 871 aaKnown RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 LVRNQ6Q4G3 990 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 ARL10Q8N8L6 244 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 APPL2Q8NEU8 664 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 DCAF11Q8TEB1 546 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 THAP3Q8WTV1 239 aaPredicted RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 CPLX3Q8WVH0 158 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 NELL1Q92832 810 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 ATP6V1E2Q96A05 226 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 EMID1Q96A84 441 aaPredicted RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 MFSD3Q96ES6 412 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 LTV1Q96GA3 475 aaPredicted RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 SPAG5Q96R06 1193 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 EPHX3Q9H6B9 360 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 GBA2Q9HCG7 927 aaPredicted RBP6.4□□□□□ -1.38
SF1-217ENST00000486960 OBP2AQ9NY56 170 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 PRKAG3Q9UGI9 489 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 AFG3L2Q9Y4W6 797 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 DGKBQ9Y6T7 804 aa6.4□□□□□ -1.38
SF1-217ENST00000486960 TAF1P21675 1872 aa6.4□□□□□ -1.39
SF1-217ENST00000486960 CD163L1Q9NR16 1453 aa6.4□□□□□ -1.39
SF1-217ENST00000486960 GCN1Q92616 2671 aaKnown RBP6.4□□□□□ -1.39
SF1-217ENST00000486960 ZFHX2Q9C0A1 2572 aaPredicted RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 ANO9A1A5B4 782 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 GPR182O15218 404 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 PDPK1O15530 556 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 KIF5CO60282 957 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 DKK1O94907 266 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 CCDC159P0C7I6 412 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 MPSTP25325 297 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 DNAJB2P25686 324 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 ADD2P35612 726 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 DGKGP49619 791 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 PRSS12P56730 875 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 NHLH1Q02575 133 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 CALD1Q05682 793 aaKnown RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 SLC9A5Q14940 896 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 KRT72Q14CN4 511 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 TTC31Q49AM3 519 aaPredicted RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 TM4SF20Q53R12 229 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 C1orf228Q6PIY5 440 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 CAPN12Q6ZSI9 719 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 TOGARAM2Q6ZUX3 1019 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 GIMAP8Q8ND71 665 aaPredicted RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 FLCNQ8NFG4 579 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 TPCN2Q8NHX9 752 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 AFAP1L1Q8TED9 768 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.39□□□□□ -1.39
SF1-217ENST00000486960 ZFPM2Q8WW38 1151 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 MYLIPQ8WY64 445 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 VMP1Q96GC9 406 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 TBATAQ96M53 351 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 FAM210AQ96ND0 272 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 FAM129BQ96TA1 746 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 C1QTNF1Q9BXJ1 281 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 DHX36Q9H2U1 1008 aaKnown RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 SEL1LQ9UBV2 794 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 XPO7Q9UIA9 1087 aaKnown RBP6.39□□□□□ -1.39
SF1-217ENST00000486960 ZNF180Q9UJW8 692 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 RABL2BQ9UNT1 228 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 EFR3BQ9Y2G0 817 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 SNX5Q9Y5X3 404 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 TTC21BQ7Z4L5 1316 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 CHD7Q9P2D1 2997 aa6.39□□□□□ -1.39
SF1-217ENST00000486960 MYO9BQ13459 2157 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 VSTM5A8MXK1 200 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 C19orf81C9J6K1 198 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 IGHA2P01877 340 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 SERPINB2P05120 415 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 U2AF1L5P0DN76 240 aaPredicted RBP6.38□□□□□ -1.39
SF1-217ENST00000486960 PHKG2P15735 406 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 UBA7P41226 1012 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 CD151P48509 253 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 USP46P62068 366 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 U2AF1Q01081 240 aaKnown RBP eCLIP6.38□□□□□ -1.39
SF1-217ENST00000486960 FOXK2Q01167 660 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 STK3Q13188 491 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 LAMC2Q13753 1193 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 ANKRD45Q5TZF3 282 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 USPL1Q5W0Q7 1092 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms