RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 PTPROQ16827 1216 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 ABCB5Q2M3G0 1257 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 MCTP2Q6DN12 878 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 MAMDC4Q6UXC1 1216 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 PANK1Q8TE04 598 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 RMDN1Q96DB5 314 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 ATG4CQ96DT6 458 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 FTOQ9C0B1 505 aaKnown RBP eCLIP10.2□□□□□ -0.78
APTX-228ENST00000486724 RAI14Q9P0K7 980 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 PARP14Q460N5 1801 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 LINC01553A4QN01 128 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
APTX-228ENST00000486724 CIAO1O76071 339 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 SUPT20HL2P0C7V6 817 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 COPB2P35606 906 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 RFX5P48382 616 aaPredicted RBP10.19□□□□□ -0.78
APTX-228ENST00000486724 BEX3Q00994 111 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 AAMPQ13685 434 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 RIOX2Q8IUF8 465 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 FBXO22Q8NEZ5 403 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 EXOC6Q8TAG9 804 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 ALDH8A1Q9H2A2 487 aaPredicted RBP10.19□□□□□ -0.78
APTX-228ENST00000486724 ABHD16BQ9H3Z7 469 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 CABP5Q9NP86 173 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 CLDND1Q9NY35 253 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 AATFQ9NY61 560 aaKnown RBP eCLIP10.19□□□□□ -0.78
APTX-228ENST00000486724 SAP30BPQ9UHR5 308 aaKnown RBP10.19□□□□□ -0.78
APTX-228ENST00000486724 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
APTX-228ENST00000486724 A0A1B0GUL7 405 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 STXBP3O00186 592 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 CYP2C9P11712 490 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 WDR5P61964 334 aaKnown RBP10.18□□□□□ -0.78
APTX-228ENST00000486724 GSE1Q14687 1217 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 ST3GAL2Q16842 350 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 CERKLQ49MI3 558 aaPredicted RBP10.18□□□□□ -0.78
APTX-228ENST00000486724 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
APTX-228ENST00000486724 TMEM57Q8N5G2 664 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 RAD9AQ99638 391 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.18□□□□□ -0.78
APTX-228ENST00000486724 SERPINB13Q9UIV8 391 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 COG6Q9Y2V7 657 aa10.18□□□□□ -0.78
APTX-228ENST00000486724 ANKRD11Q6UB99 2663 aaPredicted RBP10.18□□□□□ -0.78
APTX-228ENST00000486724 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 MBTPS2O43462 519 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 NCK2O43639 380 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 ZEB2O60315 1214 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 GJB5O95377 273 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 PUM1Q14671 1186 aaKnown RBP eCLIP10.17□□□□□ -0.78
APTX-228ENST00000486724 FSCN1Q16658 493 aaKnown RBP10.17□□□□□ -0.78
APTX-228ENST00000486724 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 FRMD5Q7Z6J6 570 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 TMCO2Q7Z6W1 182 aaPredicted RBP10.17□□□□□ -0.78
APTX-228ENST00000486724 MAGEB6Q8N7X4 407 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 EHD4Q9H223 541 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 TRMT13Q9NUP7 481 aaKnown RBP10.17□□□□□ -0.78
APTX-228ENST00000486724 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
APTX-228ENST00000486724 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 LTBRP36941 435 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 STAT3P40763 770 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 PPP4CP60510 307 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 PSMC6P62333 389 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 SMAD4Q13485 552 aaKnown RBP10.16□□□□□ -0.78
APTX-228ENST00000486724 ACAP1Q15027 740 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 CLUL1Q15846 466 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
APTX-228ENST00000486724 RPAINQ86UA6 219 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 TLK2Q86UE8 772 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 ITPRIPQ8IWB1 547 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 SPATA5Q8NB90 893 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 DDX11Q96FC9 970 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 ASIC4Q96FT7 647 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 C17orf80Q9BSJ5 609 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 NSUN3Q9H649 340 aaKnown RBP10.16□□□□□ -0.78
APTX-228ENST00000486724 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 USP24Q9UPU5 2620 aa10.16□□□□□ -0.78
APTX-228ENST00000486724 MYH1P12882 1939 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 ASTN1O14525 1302 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 DNAJC25-GNG10A0A024R161 153 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 IQCF3P0C7M6 154 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 GUCY1A2P33402 732 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 IL15P40933 162 aaPredicted RBP10.15□□□□□ -0.78
APTX-228ENST00000486724 DEFB103AP81534 67 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 TNFAIP2Q03169 654 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 SEPT2Q15019 361 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 NAA16Q6N069 864 aaPredicted RBP10.15□□□□□ -0.78
APTX-228ENST00000486724 PI16Q6UXB8 463 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 AP5M1Q9H0R1 490 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 CHMP4BQ9H444 224 aaKnown RBP10.15□□□□□ -0.78
APTX-228ENST00000486724 LRP2BPQ9P2M1 347 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 ZNF214Q9UL59 606 aaPredicted RBP10.15□□□□□ -0.78
APTX-228ENST00000486724 ADAMTS5Q9UNA0 930 aa10.15□□□□□ -0.78
APTX-228ENST00000486724 MAP1BP46821 2468 aaKnown RBP10.15□□□□□ -0.78
APTX-228ENST00000486724 MCM3APO60318 1980 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms