RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 GAS2L1Q99501 681 aaPredicted RBP17.01■□□□□ 0.31
SDCCAG3-211ENST00000486441 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
SDCCAG3-211ENST00000486441 ACAD9Q9H845 621 aa17.01■□□□□ 0.31
SDCCAG3-211ENST00000486441 INCENPQ9NQS7 918 aa17.01■□□□□ 0.31
SDCCAG3-211ENST00000486441 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
SDCCAG3-211ENST00000486441 PLA2G6O60733 806 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 FGBP02675 491 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 FDX1P10109 184 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 COL9A1P20849 921 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 SNAP25P60880 206 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 ITGA7Q13683 1181 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 CCDC174Q6PII3 467 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 MORC4Q8TE76 937 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 STAG1Q8WVM7 1258 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 GMCL1Q96IK5 515 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 RNF146Q9NTX7 359 aa17■□□□□ 0.31
SDCCAG3-211ENST00000486441 TLR3O15455 904 aaKnown RBP16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 B4GALT4O60513 344 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 MYOGP15173 224 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 MCCP23508 829 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 CCL23P55773 120 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 PSMC6P62333 389 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 TFAP4Q01664 338 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 FSCN1Q16658 493 aaKnown RBP16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 OTOP2Q7RTS6 562 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 TLK2Q86UE8 772 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 CHMP4CQ96CF2 233 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 GBF1Q92538 1859 aa16.99■□□□□ 0.31
SDCCAG3-211ENST00000486441 BRWD1Q9NSI6 2320 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 LCTP09848 1927 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 ASB14A6NK59 587 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 CABYRO75952 493 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 GNAT2P19087 354 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 NOVP48745 357 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 TDO2P48775 406 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 RABGGTBP53611 331 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 RAB30Q15771 203 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 CYP39A1Q9NYL5 469 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 THEGQ9P2T0 379 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 MSRAQ9UJ68 235 aa16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 CTDP1Q9Y5B0 961 aaPredicted RBP16.98■□□□□ 0.31
SDCCAG3-211ENST00000486441 NMT2O60551 498 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 STAT2P52630 851 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 RCSD1Q6JBY9 416 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 KCTD1Q719H9 257 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 FBXO16Q8IX29 292 aaPredicted RBP16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 ADAMTS19Q8TE59 1207 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 CHURC1Q8WUH1 139 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 Q9Y3F1 56 aa16.97■□□□□ 0.31
SDCCAG3-211ENST00000486441 LRRC37A2A6NM11 1700 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 APPP05067 770 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 ALAS1P13196 640 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 BMP1P13497 986 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 MRPS5P82675 430 aaKnown RBP16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 PPARAQ07869 468 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 ZMYM1Q5SVZ6 1142 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 EEPD1Q7L9B9 569 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 FAM160B2Q86V87 743 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 SCLYQ96I15 445 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 SLC28A3Q9HAS3 691 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.31
SDCCAG3-211ENST00000486441 IGFBP4P22692 258 aa16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 SLC1A4P43007 532 aa16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 TTLL4Q14679 1199 aa16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 NOL8Q76FK4 1167 aaKnown RBP16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 NECAB3Q96P71 396 aaPredicted RBP16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 SEZ6LQ9BYH1 1024 aa16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 AP5M1Q9H0R1 490 aa16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 ALDH8A1Q9H2A2 487 aaPredicted RBP16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 TRMT13Q9NUP7 481 aaKnown RBP16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 TCF20Q9UGU0 1960 aaKnown RBP16.95■□□□□ 0.3
SDCCAG3-211ENST00000486441 TET1Q8NFU7 2136 aa16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 RBM47A0AV96 593 aaKnown RBP16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 PDE4BQ07343 736 aa16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 DUSP28Q4G0W2 176 aa16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 TTBK2Q6IQ55 1244 aa16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 UHRF1Q96T88 793 aaPredicted RBP16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
SDCCAG3-211ENST00000486441 RFXAPO00287 272 aa16.93■□□□□ 0.3
SDCCAG3-211ENST00000486441 ARHGEF15O94989 841 aa16.93■□□□□ 0.3
SDCCAG3-211ENST00000486441 FGRP09769 529 aa16.93■□□□□ 0.3
SDCCAG3-211ENST00000486441 CYP2C9P11712 490 aa16.93■□□□□ 0.3
SDCCAG3-211ENST00000486441 TFF2Q03403 129 aa16.93■□□□□ 0.3
SDCCAG3-211ENST00000486441 CTDSPL2Q05D32 466 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms