RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 MRPS27Q92552 414 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 CPA4Q9UI42 421 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 hCG_1984214I3L0E3 225 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 NR1I2O75469 434 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 FAM160A1Q05DH4 1040 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 PABPC4Q13310 644 aaKnown RBP eCLIP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 ARHGEF6Q15052 776 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 C17orf99Q6UX52 265 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 ZNF713Q8N859 430 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 CCDC12Q8WUD4 166 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 PIBF1Q8WXW3 757 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 CLSTN2Q9H4D0 955 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 BARHL2Q9NY43 387 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 CTAGE5O15320 804 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 KIF22Q14807 665 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 SEPT2Q15019 361 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 NPY5RQ15761 445 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 CLEC10AQ8IUN9 316 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 TNFRSF25Q93038 417 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 FEZ1Q99689 392 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 MORC2Q9Y6X9 1032 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-204ENST00000486319 CUTAO60888 179 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 OSBPP22059 807 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 CMA1P23946 247 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 ATP2B2Q01814 1243 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 OTOP1Q7RTM1 612 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 BLIDQ8IZY5 108 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 DAGLBQ8NCG7 672 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 ENGASEQ8NFI3 743 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 SYNPO2Q9UMS6 1093 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 PCDHA4Q9UN74 947 aa16.68■□□□□ 0.26
POLR2J3-204ENST00000486319 STXBP3O00186 592 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 KINO60870 393 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 BMP15O95972 392 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 USP14P54578 494 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 LACTBP83111 547 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 ICA1Q05084 483 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 AXDND1Q5T1B0 1012 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 RBM43Q6ZSC3 357 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 RASGRP2Q7LDG7 609 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 DCAF4Q8WV16 495 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 GOLPH3LQ9H4A5 285 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 EMILIN3Q9NT22 766 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 FRMPD2Q68DX3 1309 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 ADGRA2Q96PE1 1338 aa16.67■□□□□ 0.26
POLR2J3-204ENST00000486319 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 ATAD5Q96QE3 1844 aa16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 CCDC85CA6NKD9 419 aa16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 FBXO46Q6PJ61 603 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 UBA5Q9GZZ9 404 aa16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 KIAA1683Q9H0B3 1180 aa16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
POLR2J3-204ENST00000486319 BCRP11274 1271 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 NAPAP54920 295 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 IRX3P78415 501 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 CAP1Q01518 475 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 CAMK4Q16566 473 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 HOMER1Q86YM7 354 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 FMR1NBQ8N0W7 255 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 KRI1Q8N9T8 703 aaKnown RBP16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 PIGSQ96S52 555 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 VAT1LQ9HCJ6 419 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 PCDHB6Q9Y5E3 794 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 A0A1B0GVL5 298 aa16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 ECM2O94769 699 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-204ENST00000486319 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms