RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 A1CFQ9NQ94 594 aaKnown RBP24.62■■□□□ 1.53
LMBR1-217ENST00000485985 MYH6P13533 1939 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 TMEM265A0A087WTH1 108 aa24.61■■□□□ 1.53
LMBR1-217ENST00000485985 MYADML2A6NDP7 307 aa24.61■■□□□ 1.53
LMBR1-217ENST00000485985 AKNAD1Q5T1N1 836 aa24.61■■□□□ 1.53
LMBR1-217ENST00000485985 CWC27Q6UX04 472 aaKnown RBP24.61■■□□□ 1.53
LMBR1-217ENST00000485985 FAM133AQ8N9E0 248 aa24.61■■□□□ 1.53
LMBR1-217ENST00000485985 TCP11L1Q9NUJ3 509 aa24.61■■□□□ 1.53
LMBR1-217ENST00000485985 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.61■■□□□ 1.53
LMBR1-217ENST00000485985 ASTN1O14525 1302 aa24.61■■□□□ 1.53
LMBR1-217ENST00000485985 TOP1P11387 765 aaKnown RBP24.6■■□□□ 1.53
LMBR1-217ENST00000485985 ALAS1P13196 640 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 CST5P28325 142 aaPredicted RBP24.6■■□□□ 1.53
LMBR1-217ENST00000485985 MFAP1P55081 439 aaKnown RBP24.6■■□□□ 1.53
LMBR1-217ENST00000485985 IRX5P78411 483 aaPredicted RBP24.6■■□□□ 1.53
LMBR1-217ENST00000485985 MUM1L1Q5H9M0 696 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 TTBK2Q6IQ55 1244 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 ARMCX2Q7L311 632 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 GLT1D1Q96MS3 346 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 ABHD16BQ9H3Z7 469 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 ELP1O95163 1332 aa24.6■■□□□ 1.53
LMBR1-217ENST00000485985 FRMPD2Q68DX3 1309 aaPredicted RBP24.6■■□□□ 1.53
LMBR1-217ENST00000485985 TIMP1P01033 207 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 FOSL2P15408 326 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 SLC16A2P36021 539 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 MFSD6Q6ZSS7 791 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 CCDC144CPQ8IYA2 1237 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 PCSK9Q8NBP7 692 aaKnown RBP24.59■■□□□ 1.53
LMBR1-217ENST00000485985 TRERF1Q96PN7 1200 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 KATNBL1Q9H079 304 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 DIAPH3Q9NSV4 1193 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 TBX21Q9UL17 535 aa24.59■■□□□ 1.53
LMBR1-217ENST00000485985 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-217ENST00000485985 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-217ENST00000485985 C6orf222P0C671 652 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-217ENST00000485985 PCP11498 1178 aaKnown RBP24.58■■□□□ 1.53
LMBR1-217ENST00000485985 PDE4AP27815 886 aa24.58■■□□□ 1.53
LMBR1-217ENST00000485985 CDK7P50613 346 aa24.58■■□□□ 1.53
LMBR1-217ENST00000485985 TKFCQ3LXA3 575 aa24.58■■□□□ 1.53
LMBR1-217ENST00000485985 CCDC144BQ3MJ40 725 aa24.58■■□□□ 1.53
LMBR1-217ENST00000485985 RANBP17Q9H2T7 1088 aaKnown RBP24.58■■□□□ 1.53
LMBR1-217ENST00000485985 CDH23Q9H251 3354 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 SOWAHBA6NEL2 793 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 ASGR1P07306 291 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 PDHBP11177 359 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 GJA9P57773 515 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 BTNL9Q6UXG8 535 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 UPF3AQ9H1J1 476 aaKnown RBP24.57■■□□□ 1.52
LMBR1-217ENST00000485985 IL25Q9H293 177 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 SPC25Q9HBM1 224 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 CCPG1Q9ULG6 757 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 DDX49Q9Y6V7 483 aaKnown RBP24.57■■□□□ 1.52
LMBR1-217ENST00000485985 MROH7Q68CQ1 1323 aa24.57■■□□□ 1.52
LMBR1-217ENST00000485985 ICAM1P05362 532 aa24.56■■□□□ 1.52
LMBR1-217ENST00000485985 IRX6P78412 446 aaPredicted RBP24.56■■□□□ 1.52
LMBR1-217ENST00000485985 SYDE2Q5VT97 1194 aa24.56■■□□□ 1.52
LMBR1-217ENST00000485985 MFSD5Q6N075 450 aa24.56■■□□□ 1.52
LMBR1-217ENST00000485985 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.56■■□□□ 1.527e-10■■■■□ 19.6
LMBR1-217ENST00000485985 GPCPD1Q9NPB8 672 aa24.56■■□□□ 1.52
LMBR1-217ENST00000485985 EYSQ5T1H1 3165 aa24.55■■□□□ 1.52
LMBR1-217ENST00000485985 GSPT1P15170 499 aaKnown RBP24.55■■□□□ 1.52
LMBR1-217ENST00000485985 DNAJB2P25686 324 aa24.55■■□□□ 1.52
LMBR1-217ENST00000485985 GNASQ5JWF2 1037 aa24.55■■□□□ 1.52
LMBR1-217ENST00000485985 VTI1AQ96AJ9 217 aa24.55■■□□□ 1.52
LMBR1-217ENST00000485985 ZKSCAN3Q9BRR0 538 aa24.55■■□□□ 1.52
LMBR1-217ENST00000485985 RNF41Q9H4P4 317 aaPredicted RBP24.55■■□□□ 1.52
LMBR1-217ENST00000485985 CYP39A1Q9NYL5 469 aa24.55■■□□□ 1.52
LMBR1-217ENST00000485985 HIP1O00291 1037 aa24.54■■□□□ 1.52
LMBR1-217ENST00000485985 ZNF213O14771 459 aa24.54■■□□□ 1.52
LMBR1-217ENST00000485985 GRIN2CQ14957 1233 aa24.54■■□□□ 1.52
LMBR1-217ENST00000485985 ESR2Q92731 530 aa24.54■■□□□ 1.52
LMBR1-217ENST00000485985 DSCC1Q9BVC3 393 aa24.54■■□□□ 1.52
LMBR1-217ENST00000485985 A0A0U1RQG5 324 aaPredicted RBP24.53■■□□□ 1.52
LMBR1-217ENST00000485985 ARVCFO00192 962 aa24.53■■□□□ 1.52
LMBR1-217ENST00000485985 CTAGE5O15320 804 aa24.53■■□□□ 1.52
LMBR1-217ENST00000485985 SNHG28P0DPA3 235 aa24.53■■□□□ 1.52
LMBR1-217ENST00000485985 ZNF543Q08ER8 600 aa24.53■■□□□ 1.52
LMBR1-217ENST00000485985 C16orf59Q7L2K0 433 aa24.53■■□□□ 1.52
LMBR1-217ENST00000485985 TTC14Q96N46 770 aa24.53■■□□□ 1.52
LMBR1-217ENST00000485985 PURBQ96QR8 312 aaKnown RBP24.53■■□□□ 1.52
LMBR1-217ENST00000485985 VCANP13611 3396 aa24.52■■□□□ 1.52
LMBR1-217ENST00000485985 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.52■■□□□ 1.52
LMBR1-217ENST00000485985 NKX3-2P78367 333 aa24.52■■□□□ 1.52
LMBR1-217ENST00000485985 PPIGQ13427 754 aaKnown RBP eCLIP24.52■■□□□ 1.521e-14■■■□□ 17
LMBR1-217ENST00000485985 NSMFQ6X4W1 530 aa24.52■■□□□ 1.52
LMBR1-217ENST00000485985 FAM126BQ8IXS8 530 aa24.52■■□□□ 1.52
LMBR1-217ENST00000485985 NFIBO00712 420 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 KDM4AO75164 1064 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 CSF2RAP15509 400 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 TMEM240Q5SV17 173 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 TTC22Q5TAA0 569 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 TIFAQ96CG3 184 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 ZNF576Q9H609 170 aa24.51■■□□□ 1.51
LMBR1-217ENST00000485985 ASB14A6NK59 587 aa24.5■■□□□ 1.51
LMBR1-217ENST00000485985 B4E1Z4 1266 aa24.5■■□□□ 1.51
LMBR1-217ENST00000485985 PTGS1P23219 599 aa24.5■■□□□ 1.51
LMBR1-217ENST00000485985 TNFAIP2Q03169 654 aa24.5■■□□□ 1.51
LMBR1-217ENST00000485985 RASIP1Q5U651 963 aa24.5■■□□□ 1.51
LMBR1-217ENST00000485985 TMEM199Q8N511 208 aa24.5■■□□□ 1.51
LMBR1-217ENST00000485985 PRUNE2Q8WUY3 3088 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms