RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 LENG1Q96BZ8 264 aaPredicted RBP21.5■■□□□ 1.03
COL1A1-206ENST00000485870 VAT1LQ9HCJ6 419 aa21.5■■□□□ 1.03
COL1A1-206ENST00000485870 PNMA2Q9UL42 364 aa21.5■■□□□ 1.03
COL1A1-206ENST00000485870 DNM1LO00429 736 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 RARBP10826 455 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 AKR1A1P14550 325 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 BAATQ14032 418 aaPredicted RBP21.49■■□□□ 1.03
COL1A1-206ENST00000485870 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 ARRDC4Q8NCT1 418 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 CLEC4DQ8WXI8 215 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 XPNPEP3Q9NQH7 507 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 NR2E3Q9Y5X4 410 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 LCTP09848 1927 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 MYH6P13533 1939 aa21.49■■□□□ 1.03
COL1A1-206ENST00000485870 PTPDC1A2A3K4 754 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 KBTBD13C9JR72 458 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 PRC1O43663 620 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 ACVR2BQ13705 512 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 PURBQ96QR8 312 aaKnown RBP21.48■■□□□ 1.03
COL1A1-206ENST00000485870 SENP6Q9GZR1 1112 aaPredicted RBP21.48■■□□□ 1.03
COL1A1-206ENST00000485870 PPP4R2Q9NY27 417 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 MAD2L2Q9UI95 211 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 FAM184BQ9ULE4 1060 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 DDX49Q9Y6V7 483 aaKnown RBP21.48■■□□□ 1.03
COL1A1-206ENST00000485870 ASTN1O14525 1302 aa21.48■■□□□ 1.03
COL1A1-206ENST00000485870 KLRF2D3W0D1 207 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 PGK1P00558 417 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 COL9A3Q14050 684 aaPredicted RBP21.47■■□□□ 1.03
COL1A1-206ENST00000485870 LRRC41Q15345 812 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 QRICH1Q2TAL8 776 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 SLC30A10Q6XR72 485 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 C7orf61Q8IZ16 206 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 IGDCC4Q8TDY8 1250 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 ABHD16BQ9H3Z7 469 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 JMJD4Q9H9V9 463 aa21.47■■□□□ 1.03
COL1A1-206ENST00000485870 GPHNQ9NQX3 736 aaPredicted RBP21.47■■□□□ 1.03
COL1A1-206ENST00000485870 ASB14A6NK59 587 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 CALML3P27482 149 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 MCM5P33992 734 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 GRM4Q14833 912 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 RNF20Q5VTR2 975 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 RNF207Q6ZRF8 634 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 CATIPQ7Z7H3 387 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 LY9Q9HBG7 655 aa21.46■■□□□ 1.03
COL1A1-206ENST00000485870 PALM3A6NDB9 673 aaPredicted RBP21.45■■□□□ 1.02
COL1A1-206ENST00000485870 LRRC26Q2I0M4 334 aa21.45■■□□□ 1.02
COL1A1-206ENST00000485870 CCDC144BQ3MJ40 725 aa21.45■■□□□ 1.02
COL1A1-206ENST00000485870 FBXO11Q86XK2 927 aa21.45■■□□□ 1.02
COL1A1-206ENST00000485870 KATNBL1Q9H079 304 aa21.45■■□□□ 1.02
COL1A1-206ENST00000485870 BAZ2BQ9UIF8 2168 aaKnown RBP21.45■■□□□ 1.02
COL1A1-206ENST00000485870 ATN1P54259 1190 aaPredicted RBP21.44■■□□□ 1.02
COL1A1-206ENST00000485870 RPS6P62753 249 aaKnown RBP21.44■■□□□ 1.02
COL1A1-206ENST00000485870 TROAPQ12815 778 aa21.44■■□□□ 1.02
COL1A1-206ENST00000485870 ERICH6BQ5W0A0 696 aa21.44■■□□□ 1.02
COL1A1-206ENST00000485870 RNF180Q86T96 592 aa21.44■■□□□ 1.02
COL1A1-206ENST00000485870 NUP133Q8WUM0 1156 aa21.44■■□□□ 1.02
COL1A1-206ENST00000485870 MYL10Q9BUA6 226 aa21.44■■□□□ 1.02
COL1A1-206ENST00000485870 ADD3Q9UEY8 706 aaKnown RBP21.44■■□□□ 1.02
COL1A1-206ENST00000485870 ABCB11O95342 1321 aa21.44■■□□□ 1.02
COL1A1-206ENST00000485870 LRRC37A2A6NM11 1700 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 SH2B2O14492 632 aaPredicted RBP21.43■■□□□ 1.02
COL1A1-206ENST00000485870 ADCY6O43306 1168 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 ALDH5A1P51649 535 aaPredicted RBP21.43■■□□□ 1.02
COL1A1-206ENST00000485870 NFXL1Q6ZNB6 911 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 EEPD1Q7L9B9 569 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 FERMT2Q96AC1 680 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 TMEM87BQ96K49 555 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 MTA3Q9BTC8 594 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 LRRC2Q9BYS8 371 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 SYNRGQ9UMZ2 1314 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 DNAH12Q6ZR08 3092 aa21.43■■□□□ 1.02
COL1A1-206ENST00000485870 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
COL1A1-206ENST00000485870 SLC35G1Q2M3R5 365 aa21.42■■□□□ 1.02
COL1A1-206ENST00000485870 HOMER1Q86YM7 354 aa21.42■■□□□ 1.02
COL1A1-206ENST00000485870 FBXO16Q8IX29 292 aaPredicted RBP21.42■■□□□ 1.02
COL1A1-206ENST00000485870 ZNF654Q8IZM8 581 aa21.42■■□□□ 1.02
COL1A1-206ENST00000485870 ZMYND8Q9ULU4 1186 aaPredicted RBP21.42■■□□□ 1.02
COL1A1-206ENST00000485870 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.41■■□□□ 1.02
COL1A1-206ENST00000485870 CCDC69A6NI79 296 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 ADAMTS4O75173 837 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 DUSP11O75319 330 aaKnown RBP21.41■■□□□ 1.02
COL1A1-206ENST00000485870 DDAH1O94760 285 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 CHRDL2Q6WN34 429 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 RASEFQ8IZ41 740 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 TBC1D5Q92609 795 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 AMNQ9BXJ7 453 aa21.41■■□□□ 1.02
COL1A1-206ENST00000485870 MRPL11Q9Y3B7 192 aaKnown RBP21.41■■□□□ 1.02
COL1A1-206ENST00000485870 ZBTB5O15062 677 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 PPP1R11O60927 126 aaPredicted RBP21.4■■□□□ 1.02
COL1A1-206ENST00000485870 SYN1P17600 705 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 NOL8Q76FK4 1167 aaKnown RBP21.4■■□□□ 1.02
COL1A1-206ENST00000485870 TMTC2Q8N394 836 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 RGS22Q8NE09 1264 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 CTCFLQ8NI51 663 aaPredicted RBP21.4■■□□□ 1.02
COL1A1-206ENST00000485870 MORC4Q8TE76 937 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 NEK1Q96PY6 1258 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 PIGSQ96S52 555 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 RIOX1Q9H6W3 641 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 PDGFCQ9NRA1 345 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms