RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ARMC5Q96C12 935 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 PAGR1Q9BTK6 254 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 ZSWIM4Q9H7M6 989 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 FBRSQ9HAH7 460 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 PARP2Q9UGN5 583 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 RCAN3Q9UKA8 241 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 KIAA1210Q9ULL0 1709 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 PIK3C2GO75747 1445 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 IQGAP1P46940 1657 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 SCAF11Q99590 1463 aaKnown RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 HSD3B2P26439 372 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 GDNFP39905 211 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 TCEAL1Q15170 157 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 TMEM67Q5HYA8 995 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 L1TD1Q5T7N2 865 aaKnown RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 SOGA3Q5TF21 947 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 SV2BQ7L1I2 683 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 FILIP1Q7Z7B0 1213 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 FMNL3Q8IVF7 1028 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 NGEFQ8N5V2 710 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 RIN3Q8TB24 985 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 PMFBP1Q8TBY8 1022 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 CD320Q9NPF0 282 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 ST14Q9Y5Y6 855 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 MADDQ8WXG6 1647 aa4.9□□□□□ -1.62
PRPF38B-205ENST00000485810 SYNMO15061 1565 aa4.9□□□□□ -1.62
PRPF38B-205ENST00000485810 DISP3Q9P2K9 1392 aa4.9□□□□□ -1.62
PRPF38B-205ENST00000485810 RPGRIP1LQ68CZ1 1315 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 ZNF521Q96K83 1311 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 CFAP69A5D8W1 941 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 GOLGA6CA6NDK9 693 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 GOLGA6BA6NDN3 693 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 SCAMP3O14828 347 aaKnown RBP4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 FANCGO15287 622 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 APPP05067 770 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 GOLGA6DP0CG33 693 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 MMP14P50281 582 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 SLBPQ14493 270 aaKnown RBP eCLIP4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 ZRSR2Q15696 482 aaKnown RBP4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 NKG7Q16617 165 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 WIPI1Q5MNZ9 446 aaPredicted RBP4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 NLGN1Q8N2Q7 840 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 ANKRD24Q8TF21 1146 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 XAGE3Q8WTP9 111 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 SNRNP27Q8WVK2 155 aaKnown RBP4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 DIRC2Q96SL1 478 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 FOXQ1Q9C009 403 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 PCDH12Q9NPG4 1184 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 GOLGA6AQ9NYA3 693 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 MAPK8IP1Q9UQF2 711 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 TLR6Q9Y2C9 796 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 SCINQ9Y6U3 715 aa4.9□□□□□ -1.63
PRPF38B-205ENST00000485810 ZFYVE16Q7Z3T8 1539 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 MYOM2P54296 1465 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 NPIPB6E9PJ23 425 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 CHD1O14646 1710 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 VDRP11473 427 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 CD53P19397 219 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 ANP32AP39687 249 aaKnown RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 PSMD2Q13200 908 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 CCDC174Q6PII3 467 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 MPZL3Q6UWV2 235 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 C22orf34Q6ZV56 151 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 HDXQ7Z353 690 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 TRMT2AQ8IZ69 625 aaKnown RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 OTUD6BQ8N6M0 293 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 PAF1Q8N7H5 531 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 PRPF38AQ8NAV1 312 aaKnown RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 SLC43A3Q8NBI5 491 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 FBXO15Q8NCQ5 510 aaPredicted RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 C1orf131Q8NDD1 294 aaKnown RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 ZNF507Q8TCN5 953 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 JARID2Q92833 1246 aaPredicted RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 MKL1Q969V6 931 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 FRMD6Q96NE9 622 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 PIF1Q9H611 641 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 NSUN3Q9H649 340 aaKnown RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 PRDM5Q9NQX1 630 aaPredicted RBP4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 SFMBT1Q9UHJ3 866 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 CAPN6Q9Y6Q1 641 aa4.89□□□□□ -1.63
PRPF38B-205ENST00000485810 TET3O43151 1660 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 LMTK2Q8IWU2 1503 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 NRXN1Q9ULB1 1477 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 CEP152O94986 1710 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 TRAPPC8Q9Y2L5 1435 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 PPP1R12AO14974 1030 aaPredicted RBP4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 PLIN1O60240 522 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 DNAJC6O75061 913 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 CTSHP09668 335 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 LMNB1P20700 586 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 LIG3P49916 1009 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 ERVFC1P60507 584 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 ETF1P62495 437 aaKnown RBP4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 HDLBPQ00341 1268 aaKnown RBP4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 POU5F1BQ06416 359 aa4.88□□□□□ -1.63
PRPF38B-205ENST00000485810 GNL2Q13823 731 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms