RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 SCLYQ96I15 445 aa13.75□□□□□ -0.21
MDH1-213ENST00000485781 WNT8AQ9H1J5 351 aa13.75□□□□□ -0.21
MDH1-213ENST00000485781 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
MDH1-213ENST00000485781 ASTN1O14525 1302 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 CHGBP05060 677 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 PFKMP08237 780 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 ACTN1P12814 892 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
MDH1-213ENST00000485781 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
MDH1-213ENST00000485781 SBK1Q52WX2 424 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 HAUS7Q99871 368 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 KATNBL1Q9H079 304 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
MDH1-213ENST00000485781 CERS4Q9HA82 394 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 COG5Q9UP83 839 aa13.74□□□□□ -0.21
MDH1-213ENST00000485781 GNEQ9Y223 722 aaKnown RBP13.74□□□□□ -0.21
MDH1-213ENST00000485781 PRRC2BQ5JSZ5 2229 aaKnown RBP13.74□□□□□ -0.21
MDH1-213ENST00000485781 RFXAPO00287 272 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 BMP3P12645 472 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 PSMC6P62333 389 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 TMEM31Q5JXX7 168 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 DEFB128Q7Z7B8 93 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 LRRC47Q8N1G4 583 aaKnown RBP13.73□□□□□ -0.21
MDH1-213ENST00000485781 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 LRFN3Q9BTN0 628 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
MDH1-213ENST00000485781 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
MDH1-213ENST00000485781 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 TMEM232C9JQI7 657 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 TTLL1O95922 423 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 CA3P07451 260 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 ALAS1P13196 640 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 SMPD1P17405 629 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 STAT2P52630 851 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 TKFCQ3LXA3 575 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
MDH1-213ENST00000485781 PANK1Q8TE04 598 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 EPHX3Q9H6B9 360 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 Q9Y3F1 56 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 MYH7P12883 1935 aa13.72□□□□□ -0.21
MDH1-213ENST00000485781 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
MDH1-213ENST00000485781 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 KIF28PB7ZC32 967 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 PRDM1O75626 825 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 APPP05067 770 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 CYP2C9P11712 490 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 TDO2P48775 406 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 FAM160B2Q86V87 743 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 FBXO16Q8IX29 292 aaPredicted RBP13.71□□□□□ -0.21
MDH1-213ENST00000485781 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 MKL1Q969V6 931 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 AGBL1Q96MI9 1066 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 STRBPQ96SI9 672 aaKnown RBP13.71□□□□□ -0.21
MDH1-213ENST00000485781 SLC9A7Q96T83 725 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
MDH1-213ENST00000485781 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
MDH1-213ENST00000485781 PDGFCQ9NRA1 345 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
MDH1-213ENST00000485781 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
MDH1-213ENST00000485781 TNKSO95271 1327 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 IGKV6D-41A0A0C4DH26 115 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 GSG1L2A8MUP6 293 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 MS4A1P11836 297 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 POU3F3P20264 500 aaPredicted RBP13.7□□□□□ -0.22
MDH1-213ENST00000485781 PTGS1P23219 599 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 RETREG2Q8NC44 543 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 HLA-CQ95604 372 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
MDH1-213ENST00000485781 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
MDH1-213ENST00000485781 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
MDH1-213ENST00000485781 MYL3P08590 195 aa13.69□□□□□ -0.22
MDH1-213ENST00000485781 SLC1A4P43007 532 aa13.69□□□□□ -0.22
MDH1-213ENST00000485781 BRDTQ58F21 947 aaPredicted RBP13.69□□□□□ -0.22
MDH1-213ENST00000485781 KRT40Q6A162 431 aa13.69□□□□□ -0.22
MDH1-213ENST00000485781 PHOSPHO2Q8TCD6 241 aa13.69□□□□□ -0.22
MDH1-213ENST00000485781 STAG1Q8WVM7 1258 aa13.69□□□□□ -0.22
MDH1-213ENST00000485781 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
MDH1-213ENST00000485781 TLL1O43897 1013 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms