RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 MTA3Q9BTC8 594 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 JMJD4Q9H9V9 463 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
PTCD1-205ENST00000485746 CYP39A1Q9NYL5 469 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
PTCD1-205ENST00000485746 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 MRPL11Q9Y3B7 192 aaKnown RBP14.56□□□□□ -0.08
PTCD1-205ENST00000485746 COL11A1P12107 1806 aaPredicted RBP14.56□□□□□ -0.08
PTCD1-205ENST00000485746 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
PTCD1-205ENST00000485746 KBTBD13C9JR72 458 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 EVI5O60447 810 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 SNAI1O95863 264 aaPredicted RBP14.55□□□□□ -0.08
PTCD1-205ENST00000485746 IGHA2P01877 340 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 AKR1A1P14550 325 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 ACVR2BQ13705 512 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 QRICH1Q2TAL8 776 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 GJC2Q5T442 439 aaPredicted RBP14.55□□□□□ -0.08
PTCD1-205ENST00000485746 UBE2Q1Q7Z7E8 422 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 HOMER1Q86YM7 354 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 MCF2L2Q86YR7 1114 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 FAM133AQ8N9E0 248 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 PIBF1Q8WXW3 757 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 MPHOSPH6Q99547 160 aaKnown RBP14.55□□□□□ -0.08
PTCD1-205ENST00000485746 ABHD16BQ9H3Z7 469 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
PTCD1-205ENST00000485746 NR2E3Q9Y5X4 410 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 SLC12A7Q9Y666 1083 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 ABCB11O95342 1321 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
PTCD1-205ENST00000485746 SOWAHBA6NEL2 793 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 B4DLN1 442 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 SH2B2O14492 632 aaPredicted RBP14.54□□□□□ -0.08
PTCD1-205ENST00000485746 DDAH1O94760 285 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 ZNF865P0CJ78 1059 aaPredicted RBP14.54□□□□□ -0.08
PTCD1-205ENST00000485746 CALM1P0DP23 149 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 CALM2P0DP24 149 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 CALM3P0DP25 149 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 MRPL12P52815 198 aaKnown RBP14.54□□□□□ -0.08
PTCD1-205ENST00000485746 TRAF1Q13077 416 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 PRPF38BQ5VTL8 546 aaKnown RBP14.54□□□□□ -0.08
PTCD1-205ENST00000485746 CLEC4DQ8WXI8 215 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 AMNQ9BXJ7 453 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 SENP6Q9GZR1 1112 aaPredicted RBP14.54□□□□□ -0.08
PTCD1-205ENST00000485746 XPNPEP3Q9NQH7 507 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 NAP1L2Q9ULW6 460 aaPredicted RBP14.54□□□□□ -0.08
PTCD1-205ENST00000485746 ZNF236Q9UL36 1845 aa14.54□□□□□ -0.08
PTCD1-205ENST00000485746 RBBP6Q7Z6E9 1792 aaKnown RBP14.53□□□□□ -0.08
PTCD1-205ENST00000485746 DNM1LO00429 736 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 ZBTB5O15062 677 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 HMGB1P09429 215 aaKnown RBP14.53□□□□□ -0.08
PTCD1-205ENST00000485746 LIFRP42702 1097 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 GNAQP50148 359 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 RPS6P62753 249 aaKnown RBP14.53□□□□□ -0.08
PTCD1-205ENST00000485746 TROAPQ12815 778 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 DHX32Q7L7V1 743 aaKnown RBP14.53□□□□□ -0.08
PTCD1-205ENST00000485746 EEPD1Q7L9B9 569 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 RNF180Q86T96 592 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 PURBQ96QR8 312 aaKnown RBP14.53□□□□□ -0.08
PTCD1-205ENST00000485746 SPC25Q9HBM1 224 aa14.53□□□□□ -0.08
PTCD1-205ENST00000485746 KIAA0100Q14667 2235 aaKnown RBP14.52□□□□□ -0.08
PTCD1-205ENST00000485746 PGK1P00558 417 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 PDE4DQ08499 809 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 TSGA10IPQ3SY00 556 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 SLC30A10Q6XR72 485 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 RAB11FIP4Q86YS3 637 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 FGD4Q96M96 766 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 JAKMIP1Q96N16 626 aaKnown RBP14.52□□□□□ -0.09
PTCD1-205ENST00000485746 PIGSQ96S52 555 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 MAP3K14Q99558 947 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 PCDHA1Q9Y5I3 950 aa14.52□□□□□ -0.09
PTCD1-205ENST00000485746 PNMA6FA0A0J9YX94 578 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 CFBP00751 764 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 RXRAP19793 462 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 PSMA5P28066 241 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 MNX1P50219 401 aaPredicted RBP14.51□□□□□ -0.09
PTCD1-205ENST00000485746 ALDH5A1P51649 535 aaPredicted RBP14.51□□□□□ -0.09
PTCD1-205ENST00000485746 LRRC41Q15345 812 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 ADCK5Q3MIX3 580 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 CCDC144BQ3MJ40 725 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 C7orf61Q8IZ16 206 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 RGS22Q8NE09 1264 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 LENG1Q96BZ8 264 aaPredicted RBP14.51□□□□□ -0.09
PTCD1-205ENST00000485746 RRP36Q96EU6 259 aaKnown RBP14.51□□□□□ -0.09
PTCD1-205ENST00000485746 TCEANC2Q96MN5 208 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 RIOX1Q9H6W3 641 aa14.51□□□□□ -0.09
PTCD1-205ENST00000485746 SEC63Q9UGP8 760 aaKnown RBP14.51□□□□□ -0.09
PTCD1-205ENST00000485746 CENPFP49454 3210 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 H0YGN5 161 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 DUSP11O75319 330 aaKnown RBP14.5□□□□□ -0.09
PTCD1-205ENST00000485746 HSPA4P34932 840 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 ADCYAP1R1P41586 468 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 ATN1P54259 1190 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms