RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 IGDCC4Q8TDY8 1250 aa20.14■□□□□ 0.81
PLD3-211ENST00000485448 UBA5Q9GZZ9 404 aa20.14■□□□□ 0.81
PLD3-211ENST00000485448 SNAI1O95863 264 aaPredicted RBP20.13■□□□□ 0.81
PLD3-211ENST00000485448 KIF5BP33176 963 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 ACVR2BQ13705 512 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 TSGA10IPQ3SY00 556 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 RASGRP2Q7LDG7 609 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 MB21D2Q8IYB1 491 aaPredicted RBP20.13■□□□□ 0.81
PLD3-211ENST00000485448 SAMD3Q8N6K7 520 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 SPC25Q9HBM1 224 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.13■□□□□ 0.81
PLD3-211ENST00000485448 ABCB11O95342 1321 aa20.13■□□□□ 0.81
PLD3-211ENST00000485448 PALM3A6NDB9 673 aaPredicted RBP20.12■□□□□ 0.81
PLD3-211ENST00000485448 REC8O95072 547 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 HMGB1P09429 215 aaKnown RBP20.12■□□□□ 0.81
PLD3-211ENST00000485448 ZNF865P0CJ78 1059 aaPredicted RBP20.12■□□□□ 0.81
PLD3-211ENST00000485448 CALM1P0DP23 149 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 CALM2P0DP24 149 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 CALM3P0DP25 149 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 COL6A1P12109 1028 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 LIFRP42702 1097 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 MNX1P50219 401 aaPredicted RBP20.12■□□□□ 0.81
PLD3-211ENST00000485448 CDC37Q16543 378 aaPredicted RBP20.12■□□□□ 0.81
PLD3-211ENST00000485448 MUM1L1Q5H9M0 696 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 PDE4DIPQ5VU43 2346 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 RNF207Q6ZRF8 634 aa20.12■□□□□ 0.81
PLD3-211ENST00000485448 MRPL11Q9Y3B7 192 aaKnown RBP20.12■□□□□ 0.81
PLD3-211ENST00000485448 EPB41L2O43491 1005 aaKnown RBP20.11■□□□□ 0.81
PLD3-211ENST00000485448 PRC1O43663 620 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 SMARCA1P28370 1054 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 GNAQP50148 359 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 CNTN2Q02246 1040 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 STOX1Q6ZVD7 989 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 ARMCX2Q7L311 632 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 FBXO11Q86XK2 927 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 DNERQ8NFT8 737 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 LZTS2Q9BRK4 669 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 AMNQ9BXJ7 453 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 VAT1LQ9HCJ6 419 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 XPNPEP3Q9NQH7 507 aa20.11■□□□□ 0.81
PLD3-211ENST00000485448 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
PLD3-211ENST00000485448 PTPDC1A2A3K4 754 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 CCDC69A6NI79 296 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 DUSP11O75319 330 aaKnown RBP20.1■□□□□ 0.81
PLD3-211ENST00000485448 DDAH1O94760 285 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 TROAPQ12815 778 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 BAATQ14032 418 aaPredicted RBP20.1■□□□□ 0.81
PLD3-211ENST00000485448 GRM4Q14833 912 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 SYNE3Q6ZMZ3 975 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 CTCFLQ8NI51 663 aaPredicted RBP20.1■□□□□ 0.81
PLD3-211ENST00000485448 DIS3LQ8TF46 1054 aaKnown RBP20.1■□□□□ 0.81
PLD3-211ENST00000485448 NEK1Q96PY6 1258 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 JMJD4Q9H9V9 463 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 MAD2L2Q9UI95 211 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 ZHX1Q9UKY1 873 aaPredicted RBP20.1■□□□□ 0.81
PLD3-211ENST00000485448 BRCA2P51587 3418 aa20.1■□□□□ 0.81
PLD3-211ENST00000485448 ZNFX1Q9P2E3 1918 aaKnown RBP20.1■□□□□ 0.81
PLD3-211ENST00000485448 SOWAHBA6NEL2 793 aa20.09■□□□□ 0.81
PLD3-211ENST00000485448 ZBTB5O15062 677 aa20.09■□□□□ 0.81
PLD3-211ENST00000485448 EIF5BO60841 1220 aaKnown RBP20.09■□□□□ 0.81
PLD3-211ENST00000485448 IQSEC1Q6DN90 963 aa20.09■□□□□ 0.81
PLD3-211ENST00000485448 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
PLD3-211ENST00000485448 CHST3Q7LGC8 479 aa20.09■□□□□ 0.81
PLD3-211ENST00000485448 CLEC4DQ8WXI8 215 aa20.09■□□□□ 0.81
PLD3-211ENST00000485448 TSEN34Q9BSV6 310 aaKnown RBP20.09■□□□□ 0.81
PLD3-211ENST00000485448 SENP6Q9GZR1 1112 aaPredicted RBP20.09■□□□□ 0.81
PLD3-211ENST00000485448 QRICH1Q2TAL8 776 aa20.08■□□□□ 0.81
PLD3-211ENST00000485448 USH1GQ495M9 461 aa20.08■□□□□ 0.81
PLD3-211ENST00000485448 MORC4Q8TE76 937 aa20.08■□□□□ 0.81
PLD3-211ENST00000485448 RIOX1Q9H6W3 641 aa20.08■□□□□ 0.81
PLD3-211ENST00000485448 SLC12A7Q9Y666 1083 aa20.08■□□□□ 0.81
PLD3-211ENST00000485448 TAF6LQ9Y6J9 622 aa20.08■□□□□ 0.81
PLD3-211ENST00000485448 TNRC18O15417 2968 aaPredicted RBP20.08■□□□□ 0.8
PLD3-211ENST00000485448 H0YGN5 161 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 NFIBO00712 420 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
PLD3-211ENST00000485448 ANTXR2P58335 489 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 RPS6P62753 249 aaKnown RBP20.07■□□□□ 0.8
PLD3-211ENST00000485448 LRRC41Q15345 812 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 CCDC144BQ3MJ40 725 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 GJC2Q5T442 439 aaPredicted RBP20.07■□□□□ 0.8
PLD3-211ENST00000485448 DHX32Q7L7V1 743 aaKnown RBP20.07■□□□□ 0.8
PLD3-211ENST00000485448 STAG2Q8N3U4 1231 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 PCSK9Q8NBP7 692 aaKnown RBP20.07■□□□□ 0.8
PLD3-211ENST00000485448 MTMR8Q96EF0 704 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 FGD4Q96M96 766 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 LY9Q9HBG7 655 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 VTA1Q9NP79 307 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 Q9Y3F1 56 aa20.07■□□□□ 0.8
PLD3-211ENST00000485448 PNMA6FA0A0J9YX94 578 aa20.06■□□□□ 0.8
PLD3-211ENST00000485448 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
PLD3-211ENST00000485448 CALML3P27482 149 aa20.06■□□□□ 0.8
PLD3-211ENST00000485448 TNFAIP2Q03169 654 aa20.06■□□□□ 0.8
PLD3-211ENST00000485448 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
PLD3-211ENST00000485448 NUP133Q8WUM0 1156 aa20.06■□□□□ 0.8
PLD3-211ENST00000485448 CPVLQ9H3G5 476 aa20.06■□□□□ 0.8
PLD3-211ENST00000485448 MOXD2PA6NHM9 499 aa20.05■□□□□ 0.8
PLD3-211ENST00000485448 SH2B2O14492 632 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms