RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SLC30A10Q6XR72 485 aa18.9■□□□□ 0.62
DDR1-246ENST00000485023 DIS3LQ8TF46 1054 aaKnown RBP18.9■□□□□ 0.62
DDR1-246ENST00000485023 PIBF1Q8WXW3 757 aa18.9■□□□□ 0.62
DDR1-246ENST00000485023 CYP39A1Q9NYL5 469 aa18.9■□□□□ 0.62
DDR1-246ENST00000485023 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
DDR1-246ENST00000485023 PFASO15067 1338 aa18.9■□□□□ 0.62
DDR1-246ENST00000485023 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
DDR1-246ENST00000485023 SOWAHBA6NEL2 793 aa18.89■□□□□ 0.61
DDR1-246ENST00000485023 DDAH1O94760 285 aa18.89■□□□□ 0.61
DDR1-246ENST00000485023 CALML3P27482 149 aa18.89■□□□□ 0.61
DDR1-246ENST00000485023 BAATQ14032 418 aaPredicted RBP18.89■□□□□ 0.61
DDR1-246ENST00000485023 SLC35G1Q2M3R5 365 aa18.89■□□□□ 0.61
DDR1-246ENST00000485023 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.61
DDR1-246ENST00000485023 CTCFLQ8NI51 663 aaPredicted RBP18.89■□□□□ 0.61
DDR1-246ENST00000485023 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
DDR1-246ENST00000485023 ZHX1Q9UKY1 873 aaPredicted RBP18.89■□□□□ 0.61
DDR1-246ENST00000485023 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
DDR1-246ENST00000485023 MYCNP04198 464 aaPredicted RBP18.88■□□□□ 0.61
DDR1-246ENST00000485023 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 LHX8Q68G74 356 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 DHX32Q7L7V1 743 aaKnown RBP18.88■□□□□ 0.61
DDR1-246ENST00000485023 MICU3Q86XE3 530 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 FBXO11Q86XK2 927 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 LENG1Q96BZ8 264 aaPredicted RBP18.88■□□□□ 0.61
DDR1-246ENST00000485023 PIGSQ96S52 555 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 MTA3Q9BTC8 594 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 OGDHLQ9ULD0 1010 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 SLC12A7Q9Y666 1083 aa18.88■□□□□ 0.61
DDR1-246ENST00000485023 ASTN1O14525 1302 aa18.87■□□□□ 0.61
DDR1-246ENST00000485023 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
DDR1-246ENST00000485023 LIFRP42702 1097 aa18.87■□□□□ 0.61
DDR1-246ENST00000485023 RNF207Q6ZRF8 634 aa18.87■□□□□ 0.61
DDR1-246ENST00000485023 ARMCX2Q7L311 632 aa18.87■□□□□ 0.61
DDR1-246ENST00000485023 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
DDR1-246ENST00000485023 CMTR1Q8N1G2 835 aaKnown RBP18.87■□□□□ 0.61
DDR1-246ENST00000485023 PAWRQ96IZ0 340 aaKnown RBP18.87■□□□□ 0.61
DDR1-246ENST00000485023 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.87■□□□□ 0.61
DDR1-246ENST00000485023 PNMA2Q9UL42 364 aa18.87■□□□□ 0.61
DDR1-246ENST00000485023 NAP1L2Q9ULW6 460 aaPredicted RBP18.87■□□□□ 0.61
DDR1-246ENST00000485023 ABCB11O95342 1321 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 SEPT4O43236 478 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 CYTH3O43739 400 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
DDR1-246ENST00000485023 PLEKHA8P1O95397 391 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 ZNF865P0CJ78 1059 aaPredicted RBP18.86■□□□□ 0.61
DDR1-246ENST00000485023 KIF5BP33176 963 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 FGD1P98174 961 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 EXOSC10Q01780 885 aaKnown RBP18.86■□□□□ 0.61
DDR1-246ENST00000485023 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 TMTC2Q8N394 836 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 KCNB2Q92953 911 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 TNRC18O15417 2968 aaPredicted RBP18.86■□□□□ 0.61
DDR1-246ENST00000485023 FRMPD3Q5JV73 1810 aa18.86■□□□□ 0.61
DDR1-246ENST00000485023 ZBTB5O15062 677 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 RPS6P62753 249 aaKnown RBP18.85■□□□□ 0.61
DDR1-246ENST00000485023 BLOC1S2Q6QNY1 142 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 MAMDC4Q6UXC1 1216 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 MSL3Q8N5Y2 521 aaKnown RBP18.85■□□□□ 0.61
DDR1-246ENST00000485023 TBC1D5Q92609 795 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 BRPF3Q9ULD4 1205 aa18.85■□□□□ 0.61
DDR1-246ENST00000485023 SMCHD1A6NHR9 2005 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 MSCO60682 206 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 HMGB1P09429 215 aaKnown RBP18.84■□□□□ 0.61
DDR1-246ENST00000485023 CASTP20810 708 aaKnown RBP18.84■□□□□ 0.61
DDR1-246ENST00000485023 MNX1P50219 401 aaPredicted RBP18.84■□□□□ 0.61
DDR1-246ENST00000485023 SYNE3Q6ZMZ3 975 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 Q6ZUG5 572 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 EEPD1Q7L9B9 569 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 SGMS1Q86VZ5 419 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 ANKLE1Q8NAG6 615 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 RIOX1Q9H6W3 641 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 LCTP09848 1927 aa18.84■□□□□ 0.61
DDR1-246ENST00000485023 MKI67P46013 3256 aaKnown RBP18.83■□□□□ 0.61
DDR1-246ENST00000485023 CALM1P0DP23 149 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 CALM2P0DP24 149 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 CALM3P0DP25 149 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 AKR1A1P14550 325 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 ALDH5A1P51649 535 aaPredicted RBP18.83■□□□□ 0.6
DDR1-246ENST00000485023 ACVR2BQ13705 512 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 GJC2Q5T442 439 aaPredicted RBP18.83■□□□□ 0.6
DDR1-246ENST00000485023 APOA5Q6Q788 366 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 NECAB2Q7Z6G3 386 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 CCDC82Q8N4S0 544 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 MAP3K14Q99558 947 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 NRBP1Q9UHY1 535 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 MRPL11Q9Y3B7 192 aaKnown RBP18.83■□□□□ 0.6
DDR1-246ENST00000485023 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
DDR1-246ENST00000485023 hCG_1642624A0A1W2PR95 340 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 ASB14A6NK59 587 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 CFBP00751 764 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 RARBP10826 455 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 APOBRQ0VD83 1088 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms