RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 ERVK-9P63128 1117 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 ERVK-24P63145 666 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 TAF1CQ15572 869 aaPredicted RBP10.8□□□□□ -0.68
NEB-213ENST00000484968 SNRNP48Q6IEG0 339 aaKnown RBP10.8□□□□□ -0.68
NEB-213ENST00000484968 RIOX2Q8IUF8 465 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 RASGRP4Q8TDF6 673 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 TNFRSF25Q93038 417 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 CHAMP1Q96JM3 812 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 PARK7Q99497 189 aaKnown RBP10.8□□□□□ -0.68
NEB-213ENST00000484968 EFCC1Q9HA90 598 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 HOMER2Q9NSB8 354 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 TMEM260Q9NX78 707 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 COL20A1Q9P218 1284 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 CCPG1Q9ULG6 757 aa10.8□□□□□ -0.68
NEB-213ENST00000484968 SMCO2A6NFE2 343 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 BTBD18B2RXH4 712 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 WNT7AO00755 349 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 TRPA1O75762 1119 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 FDX1P10109 184 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 ERCC3P19447 782 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 OAZ1P54368 228 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 NR5A1Q13285 461 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 PLS1Q14651 629 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 UBE2SQ16763 222 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 LARP1BQ659C4 914 aaKnown RBP10.79□□□□□ -0.68
NEB-213ENST00000484968 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 SMCR8Q8TEV9 937 aaPredicted RBP10.79□□□□□ -0.68
NEB-213ENST00000484968 C8orf76Q96K31 380 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 TRERF1Q96PN7 1200 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 TEX13BQ9BXU2 312 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 SEC63Q9UGP8 760 aaKnown RBP10.79□□□□□ -0.68
NEB-213ENST00000484968 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 DDX49Q9Y6V7 483 aaKnown RBP10.79□□□□□ -0.68
NEB-213ENST00000484968 ASTN1O14525 1302 aa10.79□□□□□ -0.68
NEB-213ENST00000484968 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 MMP1P03956 469 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 HSP90AA1P07900 732 aaKnown RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 HOXA13P31271 388 aaPredicted RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 GCLCP48506 637 aaPredicted RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 NAPAP54920 295 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 AKAP17AQ02040 695 aaKnown RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 GHRHRQ02643 423 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 FAM173BQ6P4H8 233 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 SLC30A10Q6XR72 485 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 MB21D1Q8N884 522 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 GPRC5AQ8NFJ5 357 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 PGBD1Q96JS3 809 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 RNF146Q9NTX7 359 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
NEB-213ENST00000484968 ABCB11O95342 1321 aa10.78□□□□□ -0.68
NEB-213ENST00000484968 STX6O43752 255 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 BRD1O95696 1058 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 HSD17B4P51659 736 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 NLRP5P59047 1200 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 RESTQ13127 1097 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 FAM110CQ1W6H9 321 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 FOXD4L5Q5VV16 416 aaPredicted RBP10.77□□□□□ -0.69
NEB-213ENST00000484968 FERMT3Q86UX7 667 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 DIS3L2Q8IYB7 885 aaKnown RBP10.77□□□□□ -0.69
NEB-213ENST00000484968 DAGLBQ8NCG7 672 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 FOXD4L4Q8WXT5 416 aaPredicted RBP10.77□□□□□ -0.69
NEB-213ENST00000484968 FGD4Q96M96 766 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 ZFYVE28Q9HCC9 887 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 CWC22Q9HCG8 908 aaKnown RBP10.77□□□□□ -0.69
NEB-213ENST00000484968 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
NEB-213ENST00000484968 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
NEB-213ENST00000484968 TSKSQ9UJT2 592 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 PCDHA6Q9UN73 950 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 PCDHA4Q9UN74 947 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 PCDHA8Q9Y5H6 950 aa10.77□□□□□ -0.69
NEB-213ENST00000484968 hCG_1984214I3L0E3 225 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 PIK3CDO00329 1044 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 RPS6P62753 249 aaKnown RBP10.76□□□□□ -0.69
NEB-213ENST00000484968 BAATQ14032 418 aaPredicted RBP10.76□□□□□ -0.69
NEB-213ENST00000484968 JAKMIP3Q5VZ66 844 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 PPP1R18Q6NYC8 613 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
NEB-213ENST00000484968 NCAPG2Q86XI2 1143 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 REM2Q8IYK8 340 aaPredicted RBP10.76□□□□□ -0.69
NEB-213ENST00000484968 ZNF713Q8N859 430 aaPredicted RBP10.76□□□□□ -0.69
NEB-213ENST00000484968 SYTL5Q8TDW5 730 aaPredicted RBP10.76□□□□□ -0.69
NEB-213ENST00000484968 WASF1Q92558 559 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 PSTPIP2Q9H939 334 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 WBP1LQ9NX94 342 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 CYP39A1Q9NYL5 469 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 MRPL11Q9Y3B7 192 aaKnown RBP10.76□□□□□ -0.69
NEB-213ENST00000484968 ZSWIM8A7E2V4 1837 aa10.76□□□□□ -0.69
NEB-213ENST00000484968 DNAJC25-GNG10A0A024R161 153 aa10.75□□□□□ -0.69
NEB-213ENST00000484968 VPS37CA5D8V6 355 aaPredicted RBP10.75□□□□□ -0.69
NEB-213ENST00000484968 SOWAHBA6NEL2 793 aa10.75□□□□□ -0.69
NEB-213ENST00000484968 COBLO75128 1261 aa10.75□□□□□ -0.69
NEB-213ENST00000484968 ALDH1A1P00352 501 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms