RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 CLIC4Q9Y696 253 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 CEP152O94986 1710 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.259e-7■■■■■ 46.1
RXRA-203ENST00000484822 COBLO75128 1261 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 SUN1O94901 812 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 SH3BGRP55822 239 aaPredicted RBP16.6■□□□□ 0.25
RXRA-203ENST00000484822 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 PCDHB13Q9Y5F0 798 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 RGS12O14924 1447 aa16.6■□□□□ 0.25
RXRA-203ENST00000484822 ADCY8P40145 1251 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 NCAPD2Q15021 1401 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 P3H4Q92791 437 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 IQCDQ96DY2 449 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 GCNT3O95395 438 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 BCRP11274 1271 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 STAT1P42224 750 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 PABPC4Q13310 644 aaKnown RBP eCLIP16.59■□□□□ 0.25
RXRA-203ENST00000484822 PPP2R5CQ13362 524 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 RDH13Q8NBN7 331 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 E9PCH4 1651 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 ZNF532Q9HCE3 1301 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 ZKSCAN8Q15776 578 aaPredicted RBP16.59■□□□□ 0.25
RXRA-203ENST00000484822 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 THAP12O43422 761 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 LRRC43Q8N309 656 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 VCX3AQ9NNX9 186 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 SPTLC3Q9NUV7 552 aa16.59■□□□□ 0.25
RXRA-203ENST00000484822 MIER3Q7Z3K6 550 aa16.58■□□□□ 0.25
RXRA-203ENST00000484822 ZNF274Q96GC6 653 aaPredicted RBP16.58■□□□□ 0.25
RXRA-203ENST00000484822 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 SH3BP5O60239 455 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 PFKFB2O60825 505 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 USPL1Q5W0Q7 1092 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 KLHL29Q96CT2 875 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.243e-6■■■■■ 32.8
RXRA-203ENST00000484822 INO80Q9ULG1 1556 aaPredicted RBP16.58■□□□□ 0.24
RXRA-203ENST00000484822 IRX4P78413 519 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 HIBCHQ6NVY1 386 aaPredicted RBP16.58■□□□□ 0.24
RXRA-203ENST00000484822 RASEFQ8IZ41 740 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 MYCT1Q8N699 235 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 EPB41L5Q9HCM4 733 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 AGLP35573 1532 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 ATP2B4P23634 1241 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 TRPC3Q13507 836 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 CALCRLQ16602 461 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 ICE2Q659A1 982 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 KRT25Q7Z3Z0 450 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 PALM2Q8IXS6 379 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 CD2APQ9Y5K6 639 aa16.58■□□□□ 0.24
RXRA-203ENST00000484822 SMTNP53814 917 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 CNKSR1Q969H4 720 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 EAF2Q96CJ1 260 aaPredicted RBP16.57■□□□□ 0.24
RXRA-203ENST00000484822 MRPL44Q9H9J2 332 aaKnown RBP16.57■□□□□ 0.24
RXRA-203ENST00000484822 ARHGEF35A5YM69 484 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 POLE2P56282 527 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 CASP8Q14790 479 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 MCTP2Q6DN12 878 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 BCAP29Q9UHQ4 241 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 BTBD18B2RXH4 712 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 HEXIM1O94992 359 aaKnown RBP16.57■□□□□ 0.24
RXRA-203ENST00000484822 EPHB4P54760 987 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 POLR2FP61218 127 aaKnown RBP16.57■□□□□ 0.24
RXRA-203ENST00000484822 FAM133BQ5BKY9 247 aaKnown RBP16.57■□□□□ 0.24
RXRA-203ENST00000484822 BSPRYQ5W0U4 402 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 AS3MTQ9HBK9 375 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 LAMC1P11047 1609 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 RASSF7Q02833 373 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 MAIP1Q8WWC4 291 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 LARSQ9P2J5 1176 aaKnown RBP16.57■□□□□ 0.24
RXRA-203ENST00000484822 CSADQ9Y600 493 aa16.57■□□□□ 0.24
RXRA-203ENST00000484822 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
RXRA-203ENST00000484822 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
RXRA-203ENST00000484822 COPB1P53618 953 aaKnown RBP16.56■□□□□ 0.24
RXRA-203ENST00000484822 AFAP1L2Q8N4X5 818 aa16.56■□□□□ 0.24
RXRA-203ENST00000484822 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
RXRA-203ENST00000484822 CIAO1O76071 339 aa16.56■□□□□ 0.24
RXRA-203ENST00000484822 SERPINB6P35237 376 aa16.56■□□□□ 0.24
RXRA-203ENST00000484822 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
RXRA-203ENST00000484822 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms