RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 CCDC70Q6NSX1 233 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 RAD9BQ6WBX8 426 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CTAGE6Q86UF2 777 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CTAGE4Q8IX94 777 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 SMYD4Q8IYR2 804 aaPredicted RBP9.67□□□□□ -0.86
TMEM248-206ENST00000484751 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
TMEM248-206ENST00000484751 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 HNRNPLLQ8WVV9 542 aaKnown RBP9.67□□□□□ -0.86
TMEM248-206ENST00000484751 P2RX5Q93086 422 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 DNAJC7Q99615 494 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 TSG101Q99816 390 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 DESI2Q9BSY9 194 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 RTFDC1Q9BY42 306 aaPredicted RBP9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CD209Q9NNX6 404 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CAPN11Q9UMQ6 739 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CCDC88AQ3V6T2 1871 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 CASZ1Q86V15 1759 aa9.67□□□□□ -0.86
TMEM248-206ENST00000484751 GAKO14976 1311 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 SPATA31A6Q5VVP1 1343 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 FAM205AQ6ZU69 1335 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 A0A1W2PQJ5 194 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 USP17L4A6NCW7 530 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 WNT7AO00755 349 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 CCNT1O60563 726 aaKnown RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 SRGNP10124 158 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 GCFC2P16383 781 aaKnown RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 MTIF2P46199 727 aaKnown RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 FXR1P51114 621 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 ADCY7P51828 1080 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 CDK17Q00537 523 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 PDE4DQ08499 809 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 PSMD2Q13200 908 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 TERF2Q15554 542 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 IL17AQ16552 155 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 CC2D1AQ6P1N0 951 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 ARHGAP27Q6ZUM4 889 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 USP17L1Q7RTZ2 530 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 CCDC84Q86UT8 332 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 MAPKAPK5Q8IW41 473 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 STAG2Q8N3U4 1231 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 C8orf37Q96NL8 207 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 CRAMP1Q96RY5 1269 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 TMX4Q9H1E5 349 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 MRPL44Q9H9J2 332 aaKnown RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 FHOD1Q9Y613 1164 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 STK24Q9Y6E0 443 aa9.66□□□□□ -0.86
TMEM248-206ENST00000484751 EPN1Q9Y6I3 576 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-206ENST00000484751 COL4A1P02462 1669 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 FLT1P17948 1338 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 KDM3AQ9Y4C1 1321 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 WTIPA6NIX2 430 aaPredicted RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 SMIM22K7EJ46 135 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 NDUFA10O95299 355 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 PLCG1P19174 1290 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 TRIM21P19474 475 aaKnown RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 CASP1P29466 404 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 NOVP48745 357 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 ZBED6P86452 979 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 LRRC63Q05C16 580 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 PDIA5Q14554 519 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 NFIXQ14938 502 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 SPA17Q15506 151 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 CALCRLQ16602 461 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 LETM2Q2VYF4 491 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 CRY2Q49AN0 593 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 NOM1Q5C9Z4 860 aaKnown RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 KRT79Q5XKE5 535 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 HDXQ7Z353 690 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 KIAA1328Q86T90 577 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 STAMQ92783 540 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 PCMTD1Q96MG8 357 aaPredicted RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 MTRQ99707 1265 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 TUBGCP2Q9BSJ2 902 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 EDEM3Q9BZQ6 932 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 TRIM9Q9C026 710 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 LUC7LQ9NQ29 371 aaKnown RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 BMP2KQ9NSY1 1161 aaPredicted RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 ZNF446Q9NWS9 450 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 SAP30BPQ9UHR5 308 aaKnown RBP9.65□□□□□ -0.86
TMEM248-206ENST00000484751 GDAQ9Y2T3 454 aa9.65□□□□□ -0.86
TMEM248-206ENST00000484751 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
TMEM248-206ENST00000484751 MYH2Q9UKX2 1941 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 NAV1Q8NEY1 1877 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 ANO9A1A5B4 782 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 PSMD14O00487 310 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 KLRC4O43908 158 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 HLA-DOAP06340 250 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 MRPL12P52815 198 aaKnown RBP9.64□□□□□ -0.87
TMEM248-206ENST00000484751 GPSM2P81274 684 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 TBC1D8BQ0IIM8 1120 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 MTF1Q14872 753 aa9.64□□□□□ -0.87
TMEM248-206ENST00000484751 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms