RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 IKQ13123 557 aaPredicted RBP18.72■□□□□ 0.59
PCCB-217ENST00000484181 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
PCCB-217ENST00000484181 CALCRLQ16602 461 aa18.72■□□□□ 0.59
PCCB-217ENST00000484181 TTBK2Q6IQ55 1244 aa18.72■□□□□ 0.59
PCCB-217ENST00000484181 CCDC150Q8NCX0 1101 aa18.72■□□□□ 0.59
PCCB-217ENST00000484181 ZNF830Q96NB3 372 aaPredicted RBP18.72■□□□□ 0.59
PCCB-217ENST00000484181 TMEM60Q9H2L4 133 aa18.72■□□□□ 0.59
PCCB-217ENST00000484181 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
PCCB-217ENST00000484181 BMP3P12645 472 aa18.71■□□□□ 0.59
PCCB-217ENST00000484181 AP3B2Q13367 1082 aa18.71■□□□□ 0.59
PCCB-217ENST00000484181 PPP4R3AQ6IN85 833 aa18.71■□□□□ 0.59
PCCB-217ENST00000484181 CALML4Q96GE6 196 aa18.71■□□□□ 0.59
PCCB-217ENST00000484181 AMNQ9BXJ7 453 aa18.71■□□□□ 0.59
PCCB-217ENST00000484181 XPO4Q9C0E2 1151 aaKnown RBP18.71■□□□□ 0.59
PCCB-217ENST00000484181 ARFGEF1Q9Y6D6 1849 aa18.71■□□□□ 0.59
PCCB-217ENST00000484181 NDUFB10O96000 172 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 TNFAIP1Q13829 316 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 QRICH1Q2TAL8 776 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 CABP7Q86V35 215 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 KCNF1Q9H3M0 494 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 PCDHA1Q9Y5I3 950 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 SYNRGQ9UMZ2 1314 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 COL4A5P29400 1685 aa18.7■□□□□ 0.58
PCCB-217ENST00000484181 BMP6P22004 513 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 CLK2P49760 499 aaKnown RBP18.69■□□□□ 0.58
PCCB-217ENST00000484181 UBASH3AP57075 661 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 AMPD3Q01432 767 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 NOLC1Q14978 699 aaKnown RBP eCLIP18.69■□□□□ 0.58
PCCB-217ENST00000484181 KARSQ15046 597 aaKnown RBP18.69■□□□□ 0.58
PCCB-217ENST00000484181 SYDE2Q5VT97 1194 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 KIAA1524Q8TCG1 905 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 TMEM260Q9NX78 707 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
PCCB-217ENST00000484181 NFE2L3Q9Y4A8 694 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 CD2APQ9Y5K6 639 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 CDK11BP21127 795 aaKnown RBP18.69■□□□□ 0.58
PCCB-217ENST00000484181 FXR2P51116 673 aaKnown RBP eCLIP18.69■□□□□ 0.582e-7■■□□□ 12.4
PCCB-217ENST00000484181 CXCL9Q07325 125 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 SPTLC3Q9NUV7 552 aa18.69■□□□□ 0.58
PCCB-217ENST00000484181 CNTNAP1P78357 1384 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 PPP1R11O60927 126 aaPredicted RBP18.68■□□□□ 0.58
PCCB-217ENST00000484181 STIM1Q13586 685 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 FILIP1Q7Z7B0 1213 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 FANCLQ9NW38 375 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 ZBTB21Q9ULJ3 1066 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 LTBP3Q9NS15 1303 aa18.68■□□□□ 0.58
PCCB-217ENST00000484181 MARCH6O60337 910 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 FOSP01100 380 aaPredicted RBP18.67■□□□□ 0.58
PCCB-217ENST00000484181 RPN1P04843 607 aaKnown RBP18.67■□□□□ 0.58
PCCB-217ENST00000484181 PPP1R2P41236 205 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 PDIA5Q14554 519 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 KCNB1Q14721 858 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 DNTTIP2Q5QJE6 756 aaKnown RBP18.67■□□□□ 0.58
PCCB-217ENST00000484181 ZNF658Q5TYW1 1059 aaPredicted RBP18.67■□□□□ 0.58
PCCB-217ENST00000484181 SPATA1Q5VX52 437 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 FBXO11Q86XK2 927 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 POTEDQ86YR6 584 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 SIAH1Q8IUQ4 282 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 IGSF22Q8N9C0 903 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 LRRC27Q9C0I9 530 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 MYOZ2Q9NPC6 264 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 STK17AQ9UEE5 414 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 NRBP1Q9UHY1 535 aa18.67■□□□□ 0.58
PCCB-217ENST00000484181 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
PCCB-217ENST00000484181 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 SLC26A4O43511 780 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 HOXA7P31268 230 aaPredicted RBP18.66■□□□□ 0.58
PCCB-217ENST00000484181 STAT2P52630 851 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 TPD52L1Q16890 204 aaPredicted RBP18.66■□□□□ 0.58
PCCB-217ENST00000484181 MOXD1Q6UVY6 613 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 TMC6Q7Z403 805 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
PCCB-217ENST00000484181 MTMR9Q96QG7 549 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 CTAGE1Q96RT6 745 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 LRWD1Q9UFC0 647 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 DDX25Q9UHL0 483 aaKnown RBP18.66■□□□□ 0.58
PCCB-217ENST00000484181 TMX2Q9Y320 296 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 FER1L6Q2WGJ9 1857 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCCB-217ENST00000484181 TECP42680 631 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 USP11P51784 963 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 UBE2SQ16763 222 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 CCDC144BQ3MJ40 725 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 ANKRD20A12PQ8NF67 263 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 HSD3B7Q9H2F3 369 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 GINM1Q9NU53 330 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 KBTBD4Q9NVX7 518 aa18.66■□□□□ 0.58
PCCB-217ENST00000484181 ASNSP08243 561 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 ATP1A3P13637 1013 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 ZNF18P17022 549 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 TXKP42681 527 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 TERF1P54274 439 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 FMR1Q06787 632 aaKnown RBP eCLIP18.65■□□□□ 0.584e-13■■■■■ 26.9
PCCB-217ENST00000484181 SPAG1Q07617 926 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 CUL4BQ13620 913 aa18.65■□□□□ 0.58
PCCB-217ENST00000484181 KRT79Q5XKE5 535 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms