RNA–Protein interactions for RNA: ENST00000484098.5

STRADB-208, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-208ENST00000484098 INVSQ9Y283 1065 aa4.5□□□□□ -1.69
STRADB-208ENST00000484098 POLR3KQ9Y2Y1 108 aaPredicted RBP4.5□□□□□ -1.69
STRADB-208ENST00000484098 LDHBP07195 334 aaKnown RBP4.49□□□□□ -1.69
STRADB-208ENST00000484098 VAV1P15498 845 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 CTSKP43235 329 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 RGL3Q3MIN7 710 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 ARSHQ5FYA8 562 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 BORAQ6PGQ7 559 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 LIMS2Q7Z4I7 341 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 FAM124AQ86V42 546 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 SMARCC2Q8TAQ2 1214 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 GATAD2BQ8WXI9 593 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 ZBTB8AQ96BR9 441 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 ZNF512BQ96KM6 892 aaPredicted RBP4.49□□□□□ -1.69
STRADB-208ENST00000484098 NOX5Q96PH1 765 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 SSBP3Q9BWW4 388 aaPredicted RBP4.49□□□□□ -1.69
STRADB-208ENST00000484098 PDLIM7Q9NR12 457 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 SPATA6Q9NWH7 488 aaPredicted RBP4.49□□□□□ -1.69
STRADB-208ENST00000484098 GFOD1Q9NXC2 390 aa4.49□□□□□ -1.69
STRADB-208ENST00000484098 SMARCA5O60264 1052 aaPredicted RBP4.48□□□□□ -1.69
STRADB-208ENST00000484098 TACR1P25103 407 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 PMLP29590 882 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 KIAA2012Q0VF49 1180 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 MEI1Q5TIA1 1274 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 HLA-DQA1Q5Y7H0 255 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 KLC2Q9H0B6 622 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 BCAS3Q9H6U6 928 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 C11orf21Q9P2W6 132 aa4.48□□□□□ -1.69
STRADB-208ENST00000484098 F6X3S4 739 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 CLEC3AO75596 197 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 P4HBP07237 508 aaKnown RBP4.47□□□□□ -1.69
STRADB-208ENST00000484098 POLR2BP30876 1174 aaKnown RBP4.47□□□□□ -1.69
STRADB-208ENST00000484098 RAD51AP2Q09MP3 1159 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 SMAD4Q13485 552 aaKnown RBP4.47□□□□□ -1.69
STRADB-208ENST00000484098 CAMK2GQ13555 558 aaPredicted RBP4.47□□□□□ -1.69
STRADB-208ENST00000484098 PALM2Q8IXS6 379 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 ASB16Q96NS5 453 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 MKRN2Q9H000 416 aaKnown RBP4.47□□□□□ -1.69
STRADB-208ENST00000484098 FBXL21Q9UKT6 434 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 PCDHB12Q9Y5F1 795 aa4.47□□□□□ -1.69
STRADB-208ENST00000484098 GSTM1P09488 218 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 LMNB2Q03252 620 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 KCNA1Q09470 495 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 ICAM4Q14773 271 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 RTP2Q5QGT7 225 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 USP48Q86UV5 1035 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 NOC4LQ9BVI4 516 aaKnown RBP4.46□□□□□ -1.7
STRADB-208ENST00000484098 AK5Q9Y6K8 562 aa4.46□□□□□ -1.7
STRADB-208ENST00000484098 SHROOM4Q9ULL8 1493 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 MROH6A6NGR9 719 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 BRD1O95696 1058 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 PF4P02776 101 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 RBM25P49756 843 aaKnown RBP4.45□□□□□ -1.7
STRADB-208ENST00000484098 SMN1Q16637 294 aaKnown RBP4.45□□□□□ -1.7
STRADB-208ENST00000484098 ZNF585AQ6P3V2 769 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 CYP2R1Q6VVX0 501 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 REC114Q7Z4M0 266 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 DSCC1Q9BVC3 393 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 RXFP1Q9HBX9 757 aa4.45□□□□□ -1.7
STRADB-208ENST00000484098 E9PSI1 815 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 LAMTOR5O43504 91 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 GSNP06396 782 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 CORO7P57737 925 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 INHBEP58166 350 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 TGFB2P61812 414 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 CACNB2Q08289 660 aaPredicted RBP4.44□□□□□ -1.7
STRADB-208ENST00000484098 FHL2Q14192 279 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 FAM26FQ5R3K3 315 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 CWF19L1Q69YN2 538 aaKnown RBP4.44□□□□□ -1.7
STRADB-208ENST00000484098 CABP7Q86V35 215 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 DDX11Q96FC9 970 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 TSPAN17Q96FV3 270 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 DEF6Q9H4E7 631 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 GMIPQ9P107 970 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 LTBP3Q9NS15 1303 aa4.44□□□□□ -1.7
STRADB-208ENST00000484098 RPL13P26373 211 aaKnown RBP4.43□□□□□ -1.7
STRADB-208ENST00000484098 MPP2Q14168 576 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 SURF1Q15526 300 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 SNAP47Q5SQN1 464 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 OVOS1Q6IE37 1185 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 CPA5Q8WXQ8 436 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 SLC12A9Q9BXP2 914 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 ZNF341Q9BYN7 854 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 CD248Q9HCU0 757 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 PPP4R1LQ9P1A2 415 aa4.43□□□□□ -1.7
STRADB-208ENST00000484098 PRPF40AO75400 957 aaKnown RBP4.42□□□□□ -1.7
STRADB-208ENST00000484098 GLI4P10075 376 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 CYP2C8P10632 490 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 TAF1CQ15572 869 aaPredicted RBP4.42□□□□□ -1.7
STRADB-208ENST00000484098 C9orf131Q5VYM1 1079 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 MCTP2Q6DN12 878 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 NUDT5Q9UKK9 219 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 GNEQ9Y223 722 aaKnown RBP4.42□□□□□ -1.7
STRADB-208ENST00000484098 TCAF1Q9Y4C2 921 aa4.42□□□□□ -1.7
STRADB-208ENST00000484098 NPEPPSL1A6NEC2 478 aa4.41□□□□□ -1.7
STRADB-208ENST00000484098 FGF10O15520 208 aaPredicted RBP4.41□□□□□ -1.7
STRADB-208ENST00000484098 L1CAMP32004 1257 aa4.41□□□□□ -1.7
STRADB-208ENST00000484098 THBS2P35442 1172 aa4.41□□□□□ -1.7
STRADB-208ENST00000484098 SELENOPP49908 381 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms