RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 BZW1Q7L1Q6 419 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 CCT8L2Q96SF2 557 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 RNF26Q9BY78 433 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 TRIM10Q9UDY6 481 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 OPA1O60313 960 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 PYGLP06737 847 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 FGFR2P21802 821 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 CASP14P31944 242 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 MYO1EQ12965 1108 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 FANCBQ8NB91 859 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 LPIN2Q92539 896 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 STAMBPL1Q96FJ0 436 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 YIPF3Q9GZM5 350 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
SEC61A1-205ENST00000483956 LRRC10BA6NIK2 292 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 APBA1Q02410 837 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 TRIM14Q14142 442 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 C6orf89Q6UWU4 347 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 NLRP14Q86W24 1093 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 CABP5Q9NP86 173 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 BATF3Q9NR55 127 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 MYH8P13535 1937 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 ERICH2A1L162 156 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 ATF3P18847 181 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 PTGISQ16647 500 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 ZNF654Q8IZM8 581 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 TSEN2Q8NCE0 465 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 A6NNZ2 444 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 DRP2Q13474 957 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 MIS18BP1Q6P0N0 1132 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 MAGEB6Q8N7X4 407 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 ACTR5Q9H9F9 607 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 GUCA1BQ9UMX6 200 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
SEC61A1-205ENST00000483956 MROH5Q6ZUA9 1318 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 XBP1P17861 261 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 PDCD2Q16342 344 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 KLHL10Q6JEL2 608 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 TRIM74Q86UV6 250 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 TRIM73Q86UV7 250 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 RUFY1Q96T51 708 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 ARMT1Q9H993 441 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 ABHD10Q9NUJ1 306 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 ATP2C2O75185 946 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 PPP1R37O75864 691 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 PRPHP41219 470 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 STX17P56962 302 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 MRPS25P82663 173 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 SPAG1Q07617 926 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 NNTQ13423 1086 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 CYP26C1Q6V0L0 522 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 NUP58Q9BVL2 599 aa12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-205ENST00000483956 AFMP43652 599 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 ERVK-24P63145 666 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 SHISA4Q96DD7 197 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 SMNDC1O75940 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 KRT14P02533 472 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 KRT2P35908 639 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 PPARDQ03181 441 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 C2orf54Q08AI8 447 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 KRT31Q15323 416 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 EZH2Q15910 746 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 ANKRD20A8PQ5CZ79 823 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms