RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SCLYQ96I15 445 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 UHRF1Q96T88 793 aaPredicted RBP15.4■□□□□ 0.06
UBR4-213ENST00000483922 SEC62Q99442 399 aaKnown RBP15.4■□□□□ 0.06
UBR4-213ENST00000483922 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 FBXO40Q9UH90 709 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 MYO9BQ13459 2157 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 TLR3O15455 904 aaKnown RBP15.39■□□□□ 0.05
UBR4-213ENST00000483922 BMP3P12645 472 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 FSCN1Q16658 493 aaKnown RBP15.39■□□□□ 0.05
UBR4-213ENST00000483922 MUM1L1Q5H9M0 696 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 ZSCAN25Q6NSZ9 544 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 CCDC174Q6PII3 467 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
UBR4-213ENST00000483922 KBTBD3Q8NAB2 608 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 SLC28A3Q9HAS3 691 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
UBR4-213ENST00000483922 RNF113AO15541 343 aaKnown RBP15.38■□□□□ 0.05
UBR4-213ENST00000483922 GPAA1O43292 621 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 ARHGEF15O94989 841 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 TTLL1O95922 423 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 EEPD1Q7L9B9 569 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 TLK2Q86UE8 772 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 IFNL3Q8IZI9 196 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 NEDD1Q8NHV4 660 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 APPBP2Q92624 585 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 LRRCC1Q9C099 1032 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 DDX19BQ9UMR2 479 aa15.38■□□□□ 0.05
UBR4-213ENST00000483922 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 NCOR1O75376 2440 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 EPOPA6NHQ4 379 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 FOXP2O15409 715 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 MCCP23508 829 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 KCNQ1P51787 676 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 C20orf194Q5TEA3 1177 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 KRT40Q6A162 431 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 PPP1R13LQ8WUF5 828 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 TRERF1Q96PN7 1200 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 ACAD9Q9H845 621 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 IL17RBQ9NRM6 502 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 ECHDC1Q9NTX5 307 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 SYNPO2Q9UMS6 1093 aa15.37■□□□□ 0.05
UBR4-213ENST00000483922 CTDP1Q9Y5B0 961 aaPredicted RBP15.37■□□□□ 0.05
UBR4-213ENST00000483922 TCF20Q9UGU0 1960 aaKnown RBP15.36■□□□□ 0.05
UBR4-213ENST00000483922 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
UBR4-213ENST00000483922 CABYRO75952 493 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 CYP2C9P11712 490 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 TFAP4Q01664 338 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 IQSEC1Q6DN90 963 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 KCTD1Q719H9 257 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 NOL8Q76FK4 1167 aaKnown RBP15.36■□□□□ 0.05
UBR4-213ENST00000483922 FBXO16Q8IX29 292 aaPredicted RBP15.36■□□□□ 0.05
UBR4-213ENST00000483922 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 STAG1Q8WVM7 1258 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 ALDH8A1Q9H2A2 487 aaPredicted RBP15.36■□□□□ 0.05
UBR4-213ENST00000483922 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
UBR4-213ENST00000483922 CYP39A1Q9NYL5 469 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 LCTP09848 1927 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 PLIN4Q96Q06 1357 aa15.36■□□□□ 0.05
UBR4-213ENST00000483922 NMT2O60551 498 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 ALAS1P13196 640 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 STAT2P52630 851 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 GMCL1Q96IK5 515 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 CERS4Q9HA82 394 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 Q9Y3F1 56 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 PCDHA11Q9Y5I1 949 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 MTCH2Q9Y6C9 303 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 SLC4A7Q9Y6M7 1214 aa15.35■□□□□ 0.05
UBR4-213ENST00000483922 ASB14A6NK59 587 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 PLA2G6O60733 806 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 FDX1P10109 184 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 POU3F3P20264 500 aaPredicted RBP15.34■□□□□ 0.05
UBR4-213ENST00000483922 TDO2P48775 406 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 PPP2R2DQ66LE6 453 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 MIER1Q8N108 512 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 MICALL1Q8N3F8 863 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 AP5M1Q9H0R1 490 aa15.34■□□□□ 0.05
UBR4-213ENST00000483922 APPP05067 770 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 CA3P07451 260 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.04
UBR4-213ENST00000483922 PLA2G5P39877 138 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 NOVP48745 357 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 PURAQ00577 322 aaKnown RBP15.33■□□□□ 0.04
UBR4-213ENST00000483922 TKFCQ3LXA3 575 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 RCSD1Q6JBY9 416 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 RPUSD2Q8IZ73 545 aaKnown RBP15.33■□□□□ 0.04
UBR4-213ENST00000483922 CHURC1Q8WUH1 139 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 KHSRPQ92945 711 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBR4-213ENST00000483922 EPHX3Q9H6B9 360 aa15.33■□□□□ 0.04
UBR4-213ENST00000483922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBR4-213ENST00000483922 SCN5AQ14524 2016 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms