RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 MAMDC4Q6UXC1 1216 aa30.04■■■□□ 2.4
PDCD4-208ENST00000483670 SYNE3Q6ZMZ3 975 aa30.04■■■□□ 2.4
PDCD4-208ENST00000483670 CRISPLD2Q9H0B8 497 aa30.04■■■□□ 2.4
PDCD4-208ENST00000483670 ABCB11O95342 1321 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 CYBAP13498 195 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 SMARCA1P28370 1054 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 MUM1L1Q5H9M0 696 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 JAKMIP1Q96N16 626 aaKnown RBP30.03■■■□□ 2.4
PDCD4-208ENST00000483670 RIOX1Q9H6W3 641 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 CYP39A1Q9NYL5 469 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 SMCHD1A6NHR9 2005 aa30.03■■■□□ 2.4
PDCD4-208ENST00000483670 TFRCP02786 760 aaKnown RBP30.02■■■□□ 2.4
PDCD4-208ENST00000483670 CCND3P30281 292 aaPredicted RBP30.02■■■□□ 2.4
PDCD4-208ENST00000483670 QRICH1Q2TAL8 776 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 BLOC1S2Q6QNY1 142 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 FBXO11Q86XK2 927 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 FAM133AQ8N9E0 248 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 ANKLE1Q8NAG6 615 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 SHISA4Q96DD7 197 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 MTMR8Q96EF0 704 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 VAT1LQ9HCJ6 419 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 GPHNQ9NQX3 736 aaPredicted RBP30.02■■■□□ 2.4
PDCD4-208ENST00000483670 CNPY2Q9Y2B0 182 aa30.02■■■□□ 2.4
PDCD4-208ENST00000483670 ZBTB5O15062 677 aa30.01■■■□□ 2.39
PDCD4-208ENST00000483670 NSMFQ6X4W1 530 aa30.01■■■□□ 2.39
PDCD4-208ENST00000483670 RGS22Q8NE09 1264 aa30.01■■■□□ 2.39
PDCD4-208ENST00000483670 AMNQ9BXJ7 453 aa30.01■■■□□ 2.39
PDCD4-208ENST00000483670 LRRC2Q9BYS8 371 aa30.01■■■□□ 2.39
PDCD4-208ENST00000483670 FGD1P98174 961 aa30■■■□□ 2.39
PDCD4-208ENST00000483670 COL9A3Q14050 684 aaPredicted RBP30■■■□□ 2.39
PDCD4-208ENST00000483670 USH1GQ495M9 461 aa30■■■□□ 2.39
PDCD4-208ENST00000483670 MRPL11Q9Y3B7 192 aaKnown RBP30■■■□□ 2.39
PDCD4-208ENST00000483670 LOC102724159A0A0B4J2E5 919 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 SEPT4O43236 478 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 CNGA1P29973 690 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 PWP2Q15269 919 aaKnown RBP29.99■■■□□ 2.39
PDCD4-208ENST00000483670 MCF2L2Q86YR7 1114 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 CLEC4DQ8WXI8 215 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 SPZ1Q9BXG8 430 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 ADD3Q9UEY8 706 aaKnown RBP29.99■■■□□ 2.39
PDCD4-208ENST00000483670 DDX20Q9UHI6 824 aaKnown RBP29.99■■■□□ 2.39
PDCD4-208ENST00000483670 OGDHLQ9ULD0 1010 aa29.99■■■□□ 2.39
PDCD4-208ENST00000483670 ASB14A6NK59 587 aa29.98■■■□□ 2.39
PDCD4-208ENST00000483670 NFIBO00712 420 aa29.98■■■□□ 2.39
PDCD4-208ENST00000483670 RCAN1P53805 252 aa29.98■■■□□ 2.39
PDCD4-208ENST00000483670 RNF207Q6ZRF8 634 aa29.98■■■□□ 2.39
PDCD4-208ENST00000483670 FBXL16Q8N461 479 aa29.98■■■□□ 2.39
PDCD4-208ENST00000483670 MYL10Q9BUA6 226 aa29.98■■■□□ 2.39
PDCD4-208ENST00000483670 PTPDC1A2A3K4 754 aa29.97■■■□□ 2.39
PDCD4-208ENST00000483670 APOA5Q6Q788 366 aa29.97■■■□□ 2.39
PDCD4-208ENST00000483670 FANCBQ8NB91 859 aa29.97■■■□□ 2.39
PDCD4-208ENST00000483670 TRPV1Q8NER1 839 aa29.97■■■□□ 2.39
PDCD4-208ENST00000483670 PNMA6FA0A0J9YX94 578 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 RPS6KB1P23443 525 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 CNTN2Q02246 1040 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 BAATQ14032 418 aaPredicted RBP29.96■■■□□ 2.39
PDCD4-208ENST00000483670 LHX8Q68G74 356 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 FGD4Q96M96 766 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 MPHOSPH6Q99547 160 aaKnown RBP29.96■■■□□ 2.39
PDCD4-208ENST00000483670 TM6SF1Q9BZW5 370 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 ABHD16BQ9H3Z7 469 aa29.96■■■□□ 2.39
PDCD4-208ENST00000483670 RBM28Q9NW13 759 aaKnown RBP29.96■■■□□ 2.39
PDCD4-208ENST00000483670 FRMPD3Q5JV73 1810 aa29.95■■■□□ 2.39
PDCD4-208ENST00000483670 CYTH3O43739 400 aa29.95■■■□□ 2.39
PDCD4-208ENST00000483670 FARP2O94887 1054 aaPredicted RBP29.95■■■□□ 2.39
PDCD4-208ENST00000483670 CASTP20810 708 aaKnown RBP29.95■■■□□ 2.39
PDCD4-208ENST00000483670 PPP2R5BQ15173 497 aa29.95■■■□□ 2.39
PDCD4-208ENST00000483670 MICU3Q86XE3 530 aa29.95■■■□□ 2.39
PDCD4-208ENST00000483670 SAMD3Q8N6K7 520 aa29.95■■■□□ 2.39
PDCD4-208ENST00000483670 TCEANC2Q96MN5 208 aa29.95■■■□□ 2.39
PDCD4-208ENST00000483670 BAZ2BQ9UIF8 2168 aaKnown RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 ZBTB43O43298 467 aa29.94■■■□□ 2.38
PDCD4-208ENST00000483670 TAL1P17542 331 aaPredicted RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 RPS6P62753 249 aaKnown RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 ARMCX2Q7L311 632 aa29.94■■■□□ 2.38
PDCD4-208ENST00000483670 HOMER1Q86YM7 354 aa29.94■■■□□ 2.38
PDCD4-208ENST00000483670 RRP36Q96EU6 259 aaKnown RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 PIGSQ96S52 555 aa29.94■■■□□ 2.38
PDCD4-208ENST00000483670 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 MAP3K20Q9NYL2 800 aaKnown RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 SEC63Q9UGP8 760 aaKnown RBP29.94■■■□□ 2.38
PDCD4-208ENST00000483670 PCDHA1Q9Y5I3 950 aa29.94■■■□□ 2.38
PDCD4-208ENST00000483670 SOWAHBA6NEL2 793 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 B4DLN1 442 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 SNAI1O95863 264 aaPredicted RBP29.93■■■□□ 2.38
PDCD4-208ENST00000483670 AKR1A1P14550 325 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 MRPL12P52815 198 aaKnown RBP29.93■■■□□ 2.38
PDCD4-208ENST00000483670 ANAPC15P60006 121 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 PRAMEF19Q5SWL8 479 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 Q6ZUG5 572 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 RUFY3Q7L099 469 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 CCDC144CPQ8IYA2 1237 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 DNERQ8NFT8 737 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 ZSWIM6Q9HCJ5 1215 aa29.93■■■□□ 2.38
PDCD4-208ENST00000483670 MCM3APO60318 1980 aa29.92■■■□□ 2.38
PDCD4-208ENST00000483670 ZNF865P0CJ78 1059 aaPredicted RBP29.92■■■□□ 2.38
PDCD4-208ENST00000483670 CALML3P27482 149 aa29.92■■■□□ 2.38
PDCD4-208ENST00000483670 UBE2Q1Q7Z7E8 422 aa29.92■■■□□ 2.38
PDCD4-208ENST00000483670 AGXT2Q9BYV1 514 aa29.92■■■□□ 2.38
PDCD4-208ENST00000483670 CYP46A1Q9Y6A2 500 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms