RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 HOXC6P09630 235 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
PTPN18-212ENST00000483617 IFNAR1P17181 557 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 RXRAP19793 462 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 SYT1P21579 422 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 DSG3P32926 999 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 ADD1P35611 737 aaKnown RBP13.15□□□□□ -0.3
PTPN18-212ENST00000483617 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
PTPN18-212ENST00000483617 TROAPQ12815 778 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 NECAB2Q7Z6G3 386 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 SHCBP1Q8NEM2 672 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.3
PTPN18-212ENST00000483617 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTPN18-212ENST00000483617 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 OGDHLQ9ULD0 1010 aa13.15□□□□□ -0.3
PTPN18-212ENST00000483617 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 MYH4Q9Y623 1939 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 JAK2O60674 1132 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 CCND3P30281 292 aaPredicted RBP13.14□□□□□ -0.31
PTPN18-212ENST00000483617 RGS22Q8NE09 1264 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
PTPN18-212ENST00000483617 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
PTPN18-212ENST00000483617 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 CEP290O15078 2479 aa13.14□□□□□ -0.31
PTPN18-212ENST00000483617 EVI5O60447 810 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 DEXIO95424 95 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
PTPN18-212ENST00000483617 ERCC3P19447 782 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 ADORA2AP29274 412 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 CDC27P30260 824 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
PTPN18-212ENST00000483617 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 PLS1Q14651 629 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 GRM4Q14833 912 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 MFSD14CQ5VZR4 134 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
PTPN18-212ENST00000483617 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
PTPN18-212ENST00000483617 MYH6P13533 1939 aa13.13□□□□□ -0.31
PTPN18-212ENST00000483617 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 FRMPD3Q5JV73 1810 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 STRNO43815 780 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 RAD21O60216 631 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 CTDNEP1O95476 244 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 BRD1O95696 1058 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 PTMSP20962 102 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 NOVP48745 357 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 GNL2Q13823 731 aaKnown RBP13.12□□□□□ -0.31
PTPN18-212ENST00000483617 TMEM132BQ14DG7 1078 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPN18-212ENST00000483617 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 GPATCH4Q5T3I0 446 aaKnown RBP13.12□□□□□ -0.31
PTPN18-212ENST00000483617 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 NCAPG2Q86XI2 1143 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 MKL1Q969V6 931 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 MROH8Q9H579 483 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 ADAMTS5Q9UNA0 930 aa13.12□□□□□ -0.31
PTPN18-212ENST00000483617 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
PTPN18-212ENST00000483617 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 CCDC96Q2M329 555 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 OLFML2BQ68BL8 750 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 LHX8Q68G74 356 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 ABRAQ8N0Z2 381 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
PTPN18-212ENST00000483617 CCDC82Q8N4S0 544 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
PTPN18-212ENST00000483617 PHKBQ93100 1093 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
PTPN18-212ENST00000483617 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
PTPN18-212ENST00000483617 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
PTPN18-212ENST00000483617 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 VWA5AO00534 786 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
PTPN18-212ENST00000483617 SLC25A27O95847 323 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 NDUFB10O96000 172 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 IGHA2P01877 340 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 CYP2C19P33261 490 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN18-212ENST00000483617 NTRK3Q16288 839 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 FOXD4L5Q5VV16 416 aaPredicted RBP13.1□□□□□ -0.31
PTPN18-212ENST00000483617 FOXD4L4Q8WXT5 416 aaPredicted RBP13.1□□□□□ -0.31
PTPN18-212ENST00000483617 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms