RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MYH6P13533 1939 aa20.98■□□□□ 0.95
HDAC6-225ENST00000483506 MSCO60682 206 aa20.98■□□□□ 0.95
HDAC6-225ENST00000483506 TAL1P17542 331 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-225ENST00000483506 DHX32Q7L7V1 743 aaKnown RBP20.98■□□□□ 0.95
HDAC6-225ENST00000483506 ZNF654Q8IZM8 581 aa20.98■□□□□ 0.95
HDAC6-225ENST00000483506 CLEC4DQ8WXI8 215 aa20.98■□□□□ 0.95
HDAC6-225ENST00000483506 TFRCP02786 760 aaKnown RBP20.97■□□□□ 0.95
HDAC6-225ENST00000483506 HMGB1P09429 215 aaKnown RBP20.97■□□□□ 0.95
HDAC6-225ENST00000483506 SLC35G1Q2M3R5 365 aa20.97■□□□□ 0.95
HDAC6-225ENST00000483506 RIOX1Q9H6W3 641 aa20.97■□□□□ 0.95
HDAC6-225ENST00000483506 DDX20Q9UHI6 824 aaKnown RBP20.97■□□□□ 0.95
HDAC6-225ENST00000483506 POTEB2H3BUK9 544 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 NFIBO00712 420 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 SEPT4O43236 478 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 FARP2O94887 1054 aaPredicted RBP20.96■□□□□ 0.95
HDAC6-225ENST00000483506 MNX1P50219 401 aaPredicted RBP20.96■□□□□ 0.95
HDAC6-225ENST00000483506 QRICH1Q2TAL8 776 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 SNX14Q9Y5W7 946 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 MCM3APO60318 1980 aa20.96■□□□□ 0.95
HDAC6-225ENST00000483506 SNAI1O95863 264 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-225ENST00000483506 CNTN2Q02246 1040 aa20.95■□□□□ 0.94
HDAC6-225ENST00000483506 USP26Q9BXU7 913 aa20.95■□□□□ 0.94
HDAC6-225ENST00000483506 ABCB11O95342 1321 aa20.95■□□□□ 0.94
HDAC6-225ENST00000483506 LRRC37A2A6NM11 1700 aa20.95■□□□□ 0.94
HDAC6-225ENST00000483506 LOC102724159A0A0B4J2E5 919 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 SOWAHBA6NEL2 793 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 CCDC69A6NI79 296 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 ZBTB5O15062 677 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 CYTH3O43739 400 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 ZNF865P0CJ78 1059 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-225ENST00000483506 CALM1P0DP23 149 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 CALM2P0DP24 149 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 CALM3P0DP25 149 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 SMARCA1P28370 1054 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 KIF5BP33176 963 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 PWP2Q15269 919 aaKnown RBP20.94■□□□□ 0.94
HDAC6-225ENST00000483506 PRAMEF19Q5SWL8 479 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 NSMFQ6X4W1 530 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 LRRC2Q9BYS8 371 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 ASTN1O14525 1302 aa20.94■□□□□ 0.94
HDAC6-225ENST00000483506 DHX16O60231 1041 aaKnown RBP20.93■□□□□ 0.94
HDAC6-225ENST00000483506 BAATQ14032 418 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-225ENST00000483506 USH1GQ495M9 461 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 NFXL1Q6ZNB6 911 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 ARMCX2Q7L311 632 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 FBXO11Q86XK2 927 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 FBXL16Q8N461 479 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 CTCFLQ8NI51 663 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-225ENST00000483506 MORC4Q8TE76 937 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 LZTS2Q9BRK4 669 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 MYL10Q9BUA6 226 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 VAT1LQ9HCJ6 419 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-225ENST00000483506 CNPY2Q9Y2B0 182 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 SLC12A7Q9Y666 1083 aa20.93■□□□□ 0.94
HDAC6-225ENST00000483506 BAZ2BQ9UIF8 2168 aaKnown RBP20.93■□□□□ 0.94
HDAC6-225ENST00000483506 PPP1R11O60927 126 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-225ENST00000483506 CNGA1P29973 690 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 GNAQP50148 359 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 GHRHRQ02643 423 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 RNF207Q6ZRF8 634 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 CCDC144CPQ8IYA2 1237 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
HDAC6-225ENST00000483506 AMNQ9BXJ7 453 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 KATNBL1Q9H079 304 aa20.92■□□□□ 0.94
HDAC6-225ENST00000483506 ASB14A6NK59 587 aa20.91■□□□□ 0.94
HDAC6-225ENST00000483506 RCAN1P53805 252 aa20.91■□□□□ 0.94
HDAC6-225ENST00000483506 RPS6P62753 249 aaKnown RBP20.91■□□□□ 0.94
HDAC6-225ENST00000483506 SLC30A10Q6XR72 485 aa20.91■□□□□ 0.94
HDAC6-225ENST00000483506 TCEANC2Q96MN5 208 aa20.91■□□□□ 0.94
HDAC6-225ENST00000483506 ABHD16BQ9H3Z7 469 aa20.91■□□□□ 0.94
HDAC6-225ENST00000483506 ADD3Q9UEY8 706 aaKnown RBP20.91■□□□□ 0.94
HDAC6-225ENST00000483506 MRPL11Q9Y3B7 192 aaKnown RBP20.91■□□□□ 0.94
HDAC6-225ENST00000483506 PTPDC1A2A3K4 754 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 AKR1A1P14550 325 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 PSMA5P28066 241 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 TRAF1Q13077 416 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 APOA5Q6Q788 366 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 BLOC1S2Q6QNY1 142 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 DIS3LQ8TF46 1054 aaKnown RBP20.9■□□□□ 0.94
HDAC6-225ENST00000483506 PIGSQ96S52 555 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 AGXT2Q9BYV1 514 aa20.9■□□□□ 0.94
HDAC6-225ENST00000483506 PNMA6FA0A0J9YX94 578 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 COL6A1P12109 1028 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 ACVR2BQ13705 512 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 NECAB2Q7Z6G3 386 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 MCF2L2Q86YR7 1114 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 FANCBQ8NB91 859 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 DNERQ8NFT8 737 aa20.89■□□□□ 0.93
HDAC6-225ENST00000483506 PAWRQ96IZ0 340 aaKnown RBP20.89■□□□□ 0.93
HDAC6-225ENST00000483506 PURBQ96QR8 312 aaKnown RBP20.89■□□□□ 0.93
HDAC6-225ENST00000483506 OPLAHO14841 1288 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 PLEKHA8P1O95397 391 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 RXRAP19793 462 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 RPS6KB1P23443 525 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 ALDH5A1P51649 535 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-225ENST00000483506 TMTC3Q6ZXV5 915 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms