RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 TRANK1O15050 2925 aa21.55■■□□□ 1.04
TNFSF13-208ENST00000483039 DYNC1LI2O43237 492 aaPredicted RBP21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 HLA-CQ95604 372 aa21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 ALDH8A1Q9H2A2 487 aaPredicted RBP21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 ACAD9Q9H845 621 aa21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 CERS4Q9HA82 394 aa21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 C11orf16Q9NQ32 467 aa21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 CLIP2Q9UDT6 1046 aa21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 MYH7P12883 1935 aa21.54■■□□□ 1.04
TNFSF13-208ENST00000483039 EPOPA6NHQ4 379 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 SUPT20HL2P0C7V6 817 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 FDX1P10109 184 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 SMPD1P17405 629 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 PSMC6P62333 389 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 IQSEC1Q6DN90 963 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 MKL1Q969V6 931 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 KIF1BPQ96EK5 621 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 SLC9A7Q96T83 725 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 MKNK2Q9HBH9 465 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 HOMER2Q9NSB8 354 aa21.53■■□□□ 1.04
TNFSF13-208ENST00000483039 SOWAHBA6NEL2 793 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 RLBP1P12271 317 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 ACTN1P12814 892 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 SBK1Q52WX2 424 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 KRT40Q6A162 431 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 PHOSPHO2Q8TCD6 241 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 BOLA2Q9H3K6 86 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 A1CFQ9NQ94 594 aaKnown RBP21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 SYNPO2Q9UMS6 1093 aa21.52■■□□□ 1.04
TNFSF13-208ENST00000483039 SCN5AQ14524 2016 aa21.51■■□□□ 1.03
TNFSF13-208ENST00000483039 IGKV6D-41A0A0C4DH26 115 aa21.51■■□□□ 1.03
TNFSF13-208ENST00000483039 DEFB128Q7Z7B8 93 aa21.51■■□□□ 1.03
TNFSF13-208ENST00000483039 ARNTL2Q8WYA1 636 aa21.51■■□□□ 1.03
TNFSF13-208ENST00000483039 KHSRPQ92945 711 aaKnown RBP eCLIP21.51■■□□□ 1.03
TNFSF13-208ENST00000483039 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
TNFSF13-208ENST00000483039 BRWD1Q9NSI6 2320 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 CHGBP05060 677 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 ATP5JP18859 108 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 PTGS1P23219 599 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 TAP1Q03518 808 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 TAPT1Q6NXT6 567 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 RPAP2Q8IXW5 612 aaPredicted RBP21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 HAUS7Q99871 368 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 PUS7LQ9H0K6 701 aaKnown RBP21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 PDGFCQ9NRA1 345 aa21.5■■□□□ 1.03
TNFSF13-208ENST00000483039 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 PI4K2BG5E9Z4 385 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 CYP2C9P11712 490 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 RFC2P35250 354 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 ZSCAN25Q6NSZ9 544 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 GMCL1P1Q8NEA9 526 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 RNF146Q9NTX7 359 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 TRMT13Q9NUP7 481 aaKnown RBP21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 TNKSO95271 1327 aa21.49■■□□□ 1.03
TNFSF13-208ENST00000483039 FAM86C2PA6NEL3 165 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 BMP3P12645 472 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 GRB10Q13322 594 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 TKFCQ3LXA3 575 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 STK11IPQ8N1F8 1099 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 POLR3EQ9NVU0 708 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 MTMR4Q9NYA4 1195 aa21.48■■□□□ 1.03
TNFSF13-208ENST00000483039 ARHGEF15O94989 841 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 GIMAP6Q6P9H5 292 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 EEPD1Q7L9B9 569 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 ALYREFQ86V81 257 aaKnown RBP21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 HERC6Q8IVU3 1022 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 FBXO16Q8IX29 292 aaPredicted RBP21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 CEP95Q96GE4 821 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 VTA1Q9NP79 307 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 ZNF536O15090 1300 aa21.47■■□□□ 1.03
TNFSF13-208ENST00000483039 MINDY4BA8MYZ0 360 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 TTLL1O95922 423 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 STAT2P52630 851 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 TMEM63BQ5T3F8 832 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 SLFN13Q68D06 897 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 KIAA1211Q6ZU35 1233 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 ZNF444Q8N0Y2 327 aaPredicted RBP21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 LRRC47Q8N1G4 583 aaKnown RBP21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 TRERF1Q96PN7 1200 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 STRBPQ96SI9 672 aaKnown RBP21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 ZNF287Q9HBT7 754 aa21.46■■□□□ 1.03
TNFSF13-208ENST00000483039 GSG1L2A8MUP6 293 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 TMEM232C9JQI7 657 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 LPXNO60711 386 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 PURAQ00577 322 aaKnown RBP21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 DUSP28Q4G0W2 176 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 FAM160B2Q86V87 743 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 CHURC1Q8WUH1 139 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 BCL11AQ9H165 835 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 CD320Q9NPF0 282 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 LMCD1Q9NZU5 365 aa21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 DDX49Q9Y6V7 483 aaKnown RBP21.45■■□□□ 1.02
TNFSF13-208ENST00000483039 PRR33A8MZF0 331 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 PITPNM1O00562 1244 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 RAB11FIP3O75154 756 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 IQCF3P0C7M6 154 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 ALAS1P13196 640 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 RETREG2Q8NC44 543 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 MORC4Q8TE76 937 aa21.44■■□□□ 1.02
TNFSF13-208ENST00000483039 CYP39A1Q9NYL5 469 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms