RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 USH1GQ495M9 461 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 MUM1L1Q5H9M0 696 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 OLFML2BQ68BL8 750 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 NSMFQ6X4W1 530 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 SGMS1Q86VZ5 419 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 MICU3Q86XE3 530 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 RAB11FIP4Q86YS3 637 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 RPTORQ8N122 1335 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 MAML3Q96JK9 1138 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNX4-205ENST00000482965 JMJD4Q9H9V9 463 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 HMX1Q9NP08 348 aaPredicted RBP10.2□□□□□ -0.78
SNX4-205ENST00000482965 A1CFQ9NQ94 594 aaKnown RBP10.2□□□□□ -0.78
SNX4-205ENST00000482965 NAP1L2Q9ULW6 460 aaPredicted RBP10.2□□□□□ -0.78
SNX4-205ENST00000482965 DIS3Q9Y2L1 958 aaKnown RBP10.2□□□□□ -0.78
SNX4-205ENST00000482965 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 PFASO15067 1338 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 ABCB11O95342 1321 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 DNAJC25-GNG10A0A024R161 153 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 POTEB2H3BUK9 544 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 CYP2C19P33261 490 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 CACNB2Q08289 660 aaPredicted RBP10.19□□□□□ -0.78
SNX4-205ENST00000482965 MAP3K21Q5TCX8 1036 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 APOA5Q6Q788 366 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 Q6ZUG5 572 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 FBXO11Q86XK2 927 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 HOMER1Q86YM7 354 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 CCDC144CPQ8IYA2 1237 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 LZTS2Q9BRK4 669 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 RIOX1Q9H6W3 641 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 CYP46A1Q9Y6A2 500 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 LCTP09848 1927 aa10.19□□□□□ -0.78
SNX4-205ENST00000482965 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 NFIBO00712 420 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 ZBTB5O15062 677 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 ZBTB43O43298 467 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 GJB1P08034 283 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 EN2P19622 333 aaPredicted RBP10.18□□□□□ -0.78
SNX4-205ENST00000482965 SLC35G1Q2M3R5 365 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 RUFY3Q7L099 469 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 FANCBQ8NB91 859 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 CLEC4DQ8WXI8 215 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 PIBF1Q8WXW3 757 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 BRF1Q92994 677 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 MTMR8Q96EF0 704 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 DEFB118Q96PH6 123 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 PIGSQ96S52 555 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 TINF2Q9BSI4 451 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 SPZ1Q9BXG8 430 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 AMNQ9BXJ7 453 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 TM6SF1Q9BZW5 370 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 MRPL11Q9Y3B7 192 aaKnown RBP10.18□□□□□ -0.78
SNX4-205ENST00000482965 FRMPD3Q5JV73 1810 aa10.18□□□□□ -0.78
SNX4-205ENST00000482965 PNMA6FA0A0J9YX94 578 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 GOLGA8AA7E2F4 631 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 GOLGA8BA8MQT2 603 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 CYTH3O43739 400 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 SGPL1O95470 568 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 SEC24BO95487 1268 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 CYBAP13498 195 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 SMARCA1P28370 1054 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 CNGA1P29973 690 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 CCND3P30281 292 aaPredicted RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 GJA8P48165 433 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 ANAPC15P60006 121 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 CNTN2Q02246 1040 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 APOBRQ0VD83 1088 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 TRAF1Q13077 416 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 BAATQ14032 418 aaPredicted RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 RTN1Q16799 776 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 RNF207Q6ZRF8 634 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 TMTC3Q6ZXV5 915 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 ZNF467Q7Z7K2 595 aaPredicted RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 MSL3Q8N5Y2 521 aaKnown RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 FAM133AQ8N9E0 248 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 U2AF1L4Q8WU68 220 aaKnown RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 RRP36Q96EU6 259 aaKnown RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 UPF3BQ9BZI7 483 aaKnown RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 PAK6Q9NQU5 681 aaPredicted RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 SEC63Q9UGP8 760 aaKnown RBP10.17□□□□□ -0.78
SNX4-205ENST00000482965 HTTP42858 3142 aa10.17□□□□□ -0.78
SNX4-205ENST00000482965 SYNGAP1Q96PV0 1343 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 PPP1R11O60927 126 aaPredicted RBP10.16□□□□□ -0.78
SNX4-205ENST00000482965 IGHA2P01877 340 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
SNX4-205ENST00000482965 CALML3P27482 149 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNX4-205ENST00000482965 RCAN1P53805 252 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 SLC30A10Q6XR72 485 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms