RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PRO3102Q9H379 93 aa15.13■□□□□ 0.01
COL21A1-209ENST00000482933 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
COL21A1-209ENST00000482933 FBXO40Q9UH90 709 aa15.13■□□□□ 0.01
COL21A1-209ENST00000482933 ISY1Q9ULR0 285 aaKnown RBP15.13■□□□□ 0.01
COL21A1-209ENST00000482933 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
COL21A1-209ENST00000482933 ZMYM6O95789 1325 aa15.13■□□□□ 0.01
COL21A1-209ENST00000482933 CCDC171Q6TFL3 1326 aa15.13■□□□□ 0.01
COL21A1-209ENST00000482933 TMEM232C9JQI7 657 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 SDSP20132 328 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 THSD4Q6ZMP0 1018 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 MSL3Q8N5Y2 521 aaKnown RBP15.12■□□□□ 0.01
COL21A1-209ENST00000482933 CHST13Q8NET6 341 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 STAG1Q8WVM7 1258 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 WNT2BQ93097 391 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 SENP6Q9GZR1 1112 aaPredicted RBP15.12■□□□□ 0.01
COL21A1-209ENST00000482933 RAVER2Q9HCJ3 691 aaKnown RBP15.12■□□□□ 0.01
COL21A1-209ENST00000482933 IL17RBQ9NRM6 502 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 RIPK3Q9Y572 518 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
COL21A1-209ENST00000482933 CEP290O15078 2479 aa15.11■□□□□ 0.01
COL21A1-209ENST00000482933 PLXNA1Q9UIW2 1896 aa15.11■□□□□ 0.01
COL21A1-209ENST00000482933 PLA2G6O60733 806 aa15.11■□□□□ 0.01
COL21A1-209ENST00000482933 IKQ13123 557 aaPredicted RBP15.11■□□□□ 0.01
COL21A1-209ENST00000482933 PRAMEF19Q5SWL8 479 aa15.11■□□□□ 0.01
COL21A1-209ENST00000482933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL21A1-209ENST00000482933 ZNF589Q86UQ0 364 aaPredicted RBP15.11■□□□□ 0.01
COL21A1-209ENST00000482933 INCENPQ9NQS7 918 aa15.11■□□□□ 0.01
COL21A1-209ENST00000482933 ZMYND8Q9ULU4 1186 aaPredicted RBP15.11■□□□□ 0.01
COL21A1-209ENST00000482933 KBTBD13C9JR72 458 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 HIP1O00291 1037 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
COL21A1-209ENST00000482933 MCCP23508 829 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 LRRC26Q2I0M4 334 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 RRP12Q5JTH9 1297 aaKnown RBP15.1■□□□□ 0.01
COL21A1-209ENST00000482933 ANO1Q5XXA6 986 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 DDX12PQ92771 950 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 CNPY2Q9Y2B0 182 aa15.1■□□□□ 0.01
COL21A1-209ENST00000482933 NMT2O60551 498 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 RARBP10826 455 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 BMP8BP34820 402 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 NOVP48745 357 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 PROX2Q3B8N5 592 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
COL21A1-209ENST00000482933 MFSD6Q6ZSS7 791 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 GDF15Q99988 308 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 RNF41Q9H4P4 317 aaPredicted RBP15.09■□□□□ 0.01
COL21A1-209ENST00000482933 DIAPH3Q9NSV4 1193 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 TCP11L1Q9NUJ3 509 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 TACC3Q9Y6A5 838 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 DNAJC25-GNG10A0A024R161 153 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 AKR1A1P14550 325 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 SYN1P17600 705 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 NT5C2P49902 561 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 TKFCQ3LXA3 575 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 AKNAD1Q5T1N1 836 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 MAMDC4Q6UXC1 1216 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 KCTD1Q719H9 257 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 LAPTM4BQ86VI4 370 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 DCAF4Q8WV16 495 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 ACAD9Q9H845 621 aa15.09■□□□□ 0.01
COL21A1-209ENST00000482933 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0.01
COL21A1-209ENST00000482933 ZNF865P0CJ78 1059 aaPredicted RBP15.08■□□□□ 0
COL21A1-209ENST00000482933 TOP1P11387 765 aaKnown RBP15.08■□□□□ 0
COL21A1-209ENST00000482933 PTPN5P54829 565 aa15.08■□□□□ 0
COL21A1-209ENST00000482933 HAND2P61296 217 aa15.08■□□□□ 0
COL21A1-209ENST00000482933 NBR1Q14596 966 aa15.08■□□□□ 0
COL21A1-209ENST00000482933 CWC27Q6UX04 472 aaKnown RBP15.08■□□□□ 0
COL21A1-209ENST00000482933 XPNPEP3Q9NQH7 507 aa15.08■□□□□ 0
COL21A1-209ENST00000482933 MTMR7Q9Y216 660 aa15.08■□□□□ 0
COL21A1-209ENST00000482933 ZNF213O14771 459 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 MAGEA10P43363 369 aaPredicted RBP15.07■□□□□ 0
COL21A1-209ENST00000482933 LRRC41Q15345 812 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 CCDC96Q2M329 555 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 SLC39A5Q6ZMH5 540 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 RNF180Q86T96 592 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 CHMP4CQ96CF2 233 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 TTC14Q96N46 770 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 HOMER2Q9NSB8 354 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 FAM184BQ9ULE4 1060 aa15.07■□□□□ 0
COL21A1-209ENST00000482933 SMCHD1A6NHR9 2005 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 ZNF536O15090 1300 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 SNAI1O95863 264 aaPredicted RBP15.06■□□□□ 0
COL21A1-209ENST00000482933 TAL1P17542 331 aaPredicted RBP15.06■□□□□ 0
COL21A1-209ENST00000482933 ESR2Q92731 530 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 AGBL1Q96MI9 1066 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 TRERF1Q96PN7 1200 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 TMEM47Q9BQJ4 181 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 ABHD16BQ9H3Z7 469 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 RNF146Q9NTX7 359 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 PRKAG2Q9UGJ0 569 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 PRR12Q9ULL5 1215 aa15.06■□□□□ 0
COL21A1-209ENST00000482933 ALAS1P13196 640 aa15.05■□□□□ -0
COL21A1-209ENST00000482933 RTP1P59025 263 aa15.05■□□□□ -0
COL21A1-209ENST00000482933 CCDC174Q6PII3 467 aa15.05■□□□□ -0
COL21A1-209ENST00000482933 ANKK1Q8NFD2 765 aa15.05■□□□□ -0
COL21A1-209ENST00000482933 DSCC1Q9BVC3 393 aa15.05■□□□□ -0
COL21A1-209ENST00000482933 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms