RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 CDC37Q16543 378 aaPredicted RBP27.49■■□□□ 1.99
RHBDF1-208ENST00000482904 USH1GQ495M9 461 aa27.49■■□□□ 1.99
RHBDF1-208ENST00000482904 BMP2KLQ5H9B9 411 aa27.49■■□□□ 1.99
RHBDF1-208ENST00000482904 MAP4K1Q92918 833 aa27.49■■□□□ 1.99
RHBDF1-208ENST00000482904 RBM27Q9P2N5 1060 aaKnown RBP27.49■■□□□ 1.99
RHBDF1-208ENST00000482904 SYNRGQ9UMZ2 1314 aa27.48■■□□□ 1.99
RHBDF1-208ENST00000482904 IFIT3O14879 490 aaKnown RBP27.48■■□□□ 1.99
RHBDF1-208ENST00000482904 FERMT2Q96AC1 680 aa27.48■■□□□ 1.99
RHBDF1-208ENST00000482904 ESYT1Q9BSJ8 1104 aa27.48■■□□□ 1.99
RHBDF1-208ENST00000482904 NEFLP07196 543 aa27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 RTP1P59025 263 aa27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 BAATQ14032 418 aaPredicted RBP27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 SEC23AQ15436 765 aa27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 CCDC144BQ3MJ40 725 aa27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 ADD3Q9UEY8 706 aaKnown RBP27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 ATP11BQ9Y2G3 1177 aa27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 TAF6LQ9Y6J9 622 aa27.47■■□□□ 1.99
RHBDF1-208ENST00000482904 SLC34A2O95436 690 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 CALML3P27482 149 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 SLC30A10Q6XR72 485 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 ADGRF4Q8IZF3 695 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 SPC25Q9HBM1 224 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 ANO2Q9NQ90 1003 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 PHF24Q9UPV7 400 aa27.46■■□□□ 1.99
RHBDF1-208ENST00000482904 ADAMTS4O75173 837 aa27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 DUSP11O75319 330 aaKnown RBP27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 CASC1Q6TDU7 716 aa27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 RNF207Q6ZRF8 634 aa27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 STOX1Q6ZVD7 989 aa27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 NOL8Q76FK4 1167 aaKnown RBP27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 PRKAG2Q9UGJ0 569 aa27.45■■□□□ 1.98
RHBDF1-208ENST00000482904 ASTN1O14525 1302 aa27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 WTAPQ15007 396 aa27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 SLC39A5Q6ZMH5 540 aa27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 CHST3Q7LGC8 479 aa27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 CLEC4DQ8WXI8 215 aa27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 PURBQ96QR8 312 aaKnown RBP27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 KATNBL1Q9H079 304 aa27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 LSG1Q9H089 658 aaKnown RBP27.44■■□□□ 1.98
RHBDF1-208ENST00000482904 C6orf222P0C671 652 aaPredicted RBP27.43■■□□□ 1.98
RHBDF1-208ENST00000482904 TMEM67Q5HYA8 995 aa27.43■■□□□ 1.98
RHBDF1-208ENST00000482904 EEPD1Q7L9B9 569 aa27.43■■□□□ 1.98
RHBDF1-208ENST00000482904 FBXO16Q8IX29 292 aaPredicted RBP27.43■■□□□ 1.98
RHBDF1-208ENST00000482904 VAT1LQ9HCJ6 419 aa27.43■■□□□ 1.98
RHBDF1-208ENST00000482904 DDX49Q9Y6V7 483 aaKnown RBP27.43■■□□□ 1.98
RHBDF1-208ENST00000482904 ABCB11O95342 1321 aa27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 A0A1W2PQ45 241 aaPredicted RBP27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 A0A1W2PQY0 241 aa27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 ADCY6O43306 1168 aa27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 MAGEA10P43363 369 aaPredicted RBP27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 ALDH5A1P51649 535 aaPredicted RBP27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 QRICH1Q2TAL8 776 aa27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 TRIM60Q495X7 471 aa27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 MPHOSPH6Q99547 160 aaKnown RBP27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 PRO3102Q9H379 93 aa27.42■■□□□ 1.98
RHBDF1-208ENST00000482904 LRRC37A2A6NM11 1700 aa27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 RPS6P62753 249 aaKnown RBP27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 TNFAIP2Q03169 654 aa27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 MB21D2Q8IYB1 491 aaPredicted RBP27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 STAG2Q8N3U4 1231 aa27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 TSEN34Q9BSV6 310 aaKnown RBP27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 PRDM5Q9NQX1 630 aaPredicted RBP27.41■■□□□ 1.98
RHBDF1-208ENST00000482904 MCM3APO60318 1980 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 MYADML2A6NDP7 307 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 MOXD2PA6NHM9 499 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 KLRF2D3W0D1 207 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 ACLYP53396 1101 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 FBXO11Q86XK2 927 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 GDF15Q99988 308 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 JMJD4Q9H9V9 463 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 VTA1Q9NP79 307 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 STARD7Q9NQZ5 370 aa27.4■■□□□ 1.98
RHBDF1-208ENST00000482904 LOC102724159A0A0B4J2E5 919 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 A0A1W2PPC1 479 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 SLC27A2O14975 620 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 CDC45O75419 566 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 FXR1P51114 621 aaKnown RBP eCLIP27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 ANTXR2P58335 489 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 SNX17Q15036 470 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 PWP2Q15269 919 aaKnown RBP27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 CATIPQ7Z7H3 387 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 PCSK9Q8NBP7 692 aaKnown RBP27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 KLHDC9Q8NEP7 349 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 NUP133Q8WUM0 1156 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 LBHD1Q9BQE6 289 aaPredicted RBP27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 UPF3AQ9H1J1 476 aaKnown RBP27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 PCDH10Q9P2E7 1040 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 MAD2L2Q9UI95 211 aa27.39■■□□□ 1.98
RHBDF1-208ENST00000482904 SMCHD1A6NHR9 2005 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 CST5P28325 142 aaPredicted RBP27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 GJA9P57773 515 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 PDE4DQ08499 809 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 GRM4Q14833 912 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 KCNA10Q16322 511 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 TLK2Q86UE8 772 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 MCF2L2Q86YR7 1114 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 SENP2Q9HC62 589 aa27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 MRPL11Q9Y3B7 192 aaKnown RBP27.38■■□□□ 1.97
RHBDF1-208ENST00000482904 LCTP09848 1927 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms