RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 KRT31Q15323 416 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 GPIHBP1Q8IV16 184 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 ENC1O14682 589 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
DDR1-244ENST00000482873 GSDMAQ96QA5 445 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
DDR1-244ENST00000482873 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 UTRNP46939 3433 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 TUBBP07437 444 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 ERCC3P19447 782 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 PRCPP42785 496 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 CORO7P57737 925 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 RIN2Q8WYP3 895 aaPredicted RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 CHP1Q99653 195 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 GUCA1BQ9UMX6 200 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 PCDHA6Q9UN73 950 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 PCDHA8Q9Y5H6 950 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 GRAPQ13588 217 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 TTC31Q49AM3 519 aaPredicted RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 CYP26C1Q6V0L0 522 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 GDAP1L1Q96MZ0 367 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 ACBD3Q9H3P7 528 aa17.06■□□□□ 0.32
DDR1-244ENST00000482873 REXO2Q9Y3B8 237 aaKnown RBP17.06■□□□□ 0.32
DDR1-244ENST00000482873 KLRF2D3W0D1 207 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 RPN1P04843 607 aaKnown RBP17.05■□□□□ 0.32
DDR1-244ENST00000482873 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
DDR1-244ENST00000482873 RASA1P20936 1047 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 SKIDA1Q1XH10 827 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 ICE2Q659A1 982 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 CCDC148Q8NFR7 591 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
DDR1-244ENST00000482873 KRT9P35527 623 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 VPS72Q15906 364 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 TFR2Q9UP52 801 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 IRS2Q9Y4H2 1338 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
DDR1-244ENST00000482873 LRRC10BA6NIK2 292 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 BAG3O95817 575 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 AARSP49588 968 aaKnown RBP eCLIP17.04■□□□□ 0.32
DDR1-244ENST00000482873 USP14P54578 494 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 AFAP1L1Q8TED9 768 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 EYA3Q99504 573 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 VIPAS39Q9H9C1 493 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
DDR1-244ENST00000482873 SRGAP2O75044 1071 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 PPFIA4O75335 1185 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 BMP15O95972 392 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 CDK8P49336 464 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 NAPAP54920 295 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 NAALADL2Q58DX5 795 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 DGKHQ86XP1 1220 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 BIN2Q9UBW5 565 aaPredicted RBP17.04■□□□□ 0.32
DDR1-244ENST00000482873 HPCAL4Q9UM19 191 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 SCN7AQ01118 1682 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
DDR1-244ENST00000482873 ZMYND10O75800 440 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 UBA7P41226 1012 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 PAK1Q13153 545 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
DDR1-244ENST00000482873 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 TMEM260Q9NX78 707 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 LIMA1Q9UHB6 759 aaKnown RBP17.04■□□□□ 0.32
DDR1-244ENST00000482873 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
DDR1-244ENST00000482873 EPN1Q9Y6I3 576 aaPredicted RBP17.04■□□□□ 0.32
DDR1-244ENST00000482873 RAD21O60216 631 aa17.03■□□□□ 0.32
DDR1-244ENST00000482873 NDUFA10O95299 355 aa17.03■□□□□ 0.32
DDR1-244ENST00000482873 COPB1P53618 953 aaKnown RBP17.03■□□□□ 0.32
DDR1-244ENST00000482873 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.03■□□□□ 0.32
DDR1-244ENST00000482873 CEP95Q96GE4 821 aa17.03■□□□□ 0.32
DDR1-244ENST00000482873 RTFDC1Q9BY42 306 aaPredicted RBP17.03■□□□□ 0.32
DDR1-244ENST00000482873 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDR1-244ENST00000482873 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms