RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 RBM28Q9NW13 759 aaKnown RBP20.2■□□□□ 0.82
DDR1-243ENST00000482050 NFIBO00712 420 aa20.19■□□□□ 0.82
DDR1-243ENST00000482050 ZBTB5O15062 677 aa20.19■□□□□ 0.82
DDR1-243ENST00000482050 PPP1R11O60927 126 aaPredicted RBP20.19■□□□□ 0.82
DDR1-243ENST00000482050 CCT2P78371 535 aaKnown RBP20.19■□□□□ 0.82
DDR1-243ENST00000482050 NSMFQ6X4W1 530 aa20.19■□□□□ 0.82
DDR1-243ENST00000482050 SLAIN1Q8ND83 568 aa20.19■□□□□ 0.82
DDR1-243ENST00000482050 FAM217BQ9NTX9 383 aaPredicted RBP20.19■□□□□ 0.82
DDR1-243ENST00000482050 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
DDR1-243ENST00000482050 SMCHD1A6NHR9 2005 aa20.19■□□□□ 0.82
DDR1-243ENST00000482050 PDIA3P30101 505 aaKnown RBP20.18■□□□□ 0.82
DDR1-243ENST00000482050 ADD1P35611 737 aaKnown RBP20.18■□□□□ 0.82
DDR1-243ENST00000482050 RBM25P49756 843 aaKnown RBP20.18■□□□□ 0.82
DDR1-243ENST00000482050 AK2P54819 239 aa20.18■□□□□ 0.82
DDR1-243ENST00000482050 STK3Q13188 491 aa20.18■□□□□ 0.82
DDR1-243ENST00000482050 TRIB2Q92519 343 aa20.18■□□□□ 0.82
DDR1-243ENST00000482050 RRP36Q96EU6 259 aaKnown RBP20.18■□□□□ 0.82
DDR1-243ENST00000482050 KIF2CQ99661 725 aa20.18■□□□□ 0.82
DDR1-243ENST00000482050 AMNQ9BXJ7 453 aa20.18■□□□□ 0.82
DDR1-243ENST00000482050 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
DDR1-243ENST00000482050 A1CFQ9NQ94 594 aaKnown RBP20.18■□□□□ 0.82
DDR1-243ENST00000482050 FLRT1Q9NZU1 646 aa20.18■□□□□ 0.82
DDR1-243ENST00000482050 PNMA6FA0A0J9YX94 578 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 XRCC5P13010 732 aaKnown RBP20.17■□□□□ 0.82
DDR1-243ENST00000482050 RCAN1P53805 252 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 TRIM32Q13049 653 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 PXYLP1Q8TE99 480 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 CLEC4DQ8WXI8 215 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 SEC63Q9UGP8 760 aaKnown RBP20.17■□□□□ 0.82
DDR1-243ENST00000482050 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 PCDHA1Q9Y5I3 950 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 ABCB11O95342 1321 aa20.17■□□□□ 0.82
DDR1-243ENST00000482050 ZNF236Q9UL36 1845 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 PPFIA3O75145 1194 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 INHAP05111 366 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 HOXC6P09630 235 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 SMARCA1P28370 1054 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 EVCP57679 992 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 CNTN2Q02246 1040 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 SLC5A4Q9NY91 659 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 CNTNAP5Q8WYK1 1306 aa20.16■□□□□ 0.82
DDR1-243ENST00000482050 POTEB2H3BUK9 544 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 HMGCRP04035 888 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 BAATQ14032 418 aaPredicted RBP20.15■□□□□ 0.82
DDR1-243ENST00000482050 ZNF792Q3KQV3 632 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.15■□□□□ 0.82
DDR1-243ENST00000482050 ARMC5Q96C12 935 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 MAML3Q96JK9 1138 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 PURBQ96QR8 312 aaKnown RBP20.15■□□□□ 0.82
DDR1-243ENST00000482050 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
DDR1-243ENST00000482050 CYP39A1Q9NYL5 469 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 TPCN1Q9ULQ1 816 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 MRPL11Q9Y3B7 192 aaKnown RBP20.15■□□□□ 0.82
DDR1-243ENST00000482050 MYH6P13533 1939 aa20.15■□□□□ 0.82
DDR1-243ENST00000482050 ZNFX1Q9P2E3 1918 aaKnown RBP20.14■□□□□ 0.81
DDR1-243ENST00000482050 NID2Q14112 1375 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 PFASO15067 1338 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 DNAJC25-GNG10A0A024R161 153 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 CCDC85CA6NKD9 419 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 CALML3P27482 149 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 CYP2C19P33261 490 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 FUT2Q10981 343 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 ANKRD1Q15327 319 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 MTFR1Q15390 333 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 SLC30A10Q6XR72 485 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 TBC1D5Q92609 795 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 ZNF274Q96GC6 653 aaPredicted RBP20.14■□□□□ 0.81
DDR1-243ENST00000482050 ZNF333Q96JL9 665 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 TBC1D32Q96NH3 1257 aa20.14■□□□□ 0.81
DDR1-243ENST00000482050 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
DDR1-243ENST00000482050 UBXN2AP68543 259 aa20.13■□□□□ 0.81
DDR1-243ENST00000482050 PPP2R5BQ15173 497 aa20.13■□□□□ 0.81
DDR1-243ENST00000482050 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
DDR1-243ENST00000482050 TRMT44Q8IYL2 757 aaKnown RBP20.13■□□□□ 0.81
DDR1-243ENST00000482050 HTTP42858 3142 aa20.12■□□□□ 0.81
DDR1-243ENST00000482050 PRKAR2AP13861 404 aaKnown RBP20.12■□□□□ 0.81
DDR1-243ENST00000482050 MFSD14CQ5VZR4 134 aa20.12■□□□□ 0.81
DDR1-243ENST00000482050 HEATR3Q7Z4Q2 680 aa20.12■□□□□ 0.81
DDR1-243ENST00000482050 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
DDR1-243ENST00000482050 GPKOWQ92917 476 aaPredicted RBP eCLIP20.12■□□□□ 0.81
DDR1-243ENST00000482050 PHKBQ93100 1093 aa20.12■□□□□ 0.81
DDR1-243ENST00000482050 FGD4Q96M96 766 aa20.12■□□□□ 0.81
DDR1-243ENST00000482050 SLKQ9H2G2 1235 aaPredicted RBP20.12■□□□□ 0.81
DDR1-243ENST00000482050 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 OPLAHO14841 1288 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 DTNBO60941 627 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 LARGE1O95461 756 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 CFBP00751 764 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 RPS6P62753 249 aaKnown RBP20.11■□□□□ 0.81
DDR1-243ENST00000482050 CACNB2Q08289 660 aaPredicted RBP20.11■□□□□ 0.81
DDR1-243ENST00000482050 OLFML2BQ68BL8 750 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 UNC93B1Q9H1C4 597 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 DIS3Q9Y2L1 958 aaKnown RBP20.11■□□□□ 0.81
DDR1-243ENST00000482050 DDX49Q9Y6V7 483 aaKnown RBP20.11■□□□□ 0.81
DDR1-243ENST00000482050 PLXNA1Q9UIW2 1896 aa20.11■□□□□ 0.81
DDR1-243ENST00000482050 CPLX1O14810 134 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 CAPN15O75808 1086 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 CCL5P13501 91 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms