RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TTC6Q86TZ1 520 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 ZBTB38Q8NAP3 1195 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 STK35Q8TDR2 534 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 RUBCNLQ9H714 662 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 TNRC18O15417 2968 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 TBX1O43435 398 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 GADD45BO75293 160 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 RFPL1O75677 317 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 TCEA3O75764 348 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 DDAH1O94760 285 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 SLC5A1P13866 664 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 HALP42357 657 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 FXR1P51114 621 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMC6-208ENST00000481708 ABCB5Q2M3G0 1257 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 FBXW10Q5XX13 1052 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 RBBP8NLQ8NC74 664 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 SERINC2Q96SA4 455 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 ZCCHC2Q9C0B9 1178 aaKnown RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 TPX2Q9ULW0 747 aaKnown RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 FAM50BQ9Y247 325 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 GPC6Q9Y625 555 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 OTOFQ9HC10 1997 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 IBTKQ9P2D0 1353 aaPredicted RBP4.15□□□□□ -1.74
SMC6-208ENST00000481708 NEMP1O14524 444 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 RHOBTB3O94955 611 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 C6orf222P0C671 652 aaPredicted RBP4.15□□□□□ -1.74
SMC6-208ENST00000481708 TGFB3P10600 412 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 ARSDP51689 593 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 SNAP47Q5SQN1 464 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 KIAA0319Q5VV43 1072 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 SYDE1Q6ZW31 735 aaPredicted RBP4.15□□□□□ -1.74
SMC6-208ENST00000481708 REC114Q7Z4M0 266 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 NELL1Q92832 810 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 TRIM39Q9HCM9 518 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 AAASQ9NRG9 546 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 SLC5A4Q9NY91 659 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 SUCOQ9UBS9 1254 aaKnown RBP4.15□□□□□ -1.74
SMC6-208ENST00000481708 MCM8Q9UJA3 840 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 MAPRE3Q9UPY8 281 aa4.15□□□□□ -1.74
SMC6-208ENST00000481708 COL11A1P12107 1806 aaPredicted RBP4.15□□□□□ -1.74
SMC6-208ENST00000481708 CCDC163A0A0D9SF12 145 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 GRIN3BO60391 1043 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 RFPL3O75679 317 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 TOMM20Q15388 145 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 FXNQ16595 210 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 COL13A1Q5TAT6 717 aaPredicted RBP4.15□□□□□ -1.75
SMC6-208ENST00000481708 RIN3Q8TB24 985 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 GATAD2BQ8WXI9 593 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 PPM1EQ8WY54 764 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 GAL3ST3Q96A11 431 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 CHMP4CQ96CF2 233 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 SPATA9Q9BWV2 254 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 CRISPLD1Q9H336 500 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 AASDHPPTQ9NRN7 309 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 IP6K2Q9UHH9 426 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 R3HCC1Q9Y3T6 440 aaKnown RBP4.15□□□□□ -1.75
SMC6-208ENST00000481708 SOBPA7XYQ1 873 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 PHACTR2O75167 634 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 APBA3O96018 575 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 IARSP41252 1262 aaKnown RBP4.15□□□□□ -1.75
SMC6-208ENST00000481708 SARSP49591 514 aaKnown RBP4.15□□□□□ -1.75
SMC6-208ENST00000481708 USP14P54578 494 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 PPP2R5EQ16537 467 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 INAVAQ3KP66 663 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 TTBK2Q6IQ55 1244 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 CMTR1Q8N1G2 835 aaKnown RBP4.15□□□□□ -1.75
SMC6-208ENST00000481708 ATL2Q8NHH9 583 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 NAA15Q9BXJ9 866 aaKnown RBP4.15□□□□□ -1.75
SMC6-208ENST00000481708 CLIC5Q9NZA1 410 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 DACH1Q9UI36 760 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 PPIP5K1Q6PFW1 1433 aa4.15□□□□□ -1.75
SMC6-208ENST00000481708 PHIPQ8WWQ0 1821 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 CILPO75339 1184 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 SMCPP49901 116 aaPredicted RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 GTF2A2P52657 109 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 UBAP2LQ14157 1087 aaKnown RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 ARMC3Q5W041 872 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 WDR66Q8TBY9 1149 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 RSAD1Q9HA92 442 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 TIMM44O43615 452 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 AGR2O95994 175 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 ASGR2P07307 311 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 PDE12Q6L8Q7 609 aaKnown RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 CNNM4Q6P4Q7 775 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 PDXDC1Q6P996 788 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 CMIPQ8IY22 773 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 LEO1Q8WVC0 666 aaPredicted RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 LRRC27Q9C0I9 530 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 CTDP1Q9Y5B0 961 aaPredicted RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 EDC4Q6P2E9 1401 aaKnown RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 A6NCN8 305 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 ST8SIA5O15466 376 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 TMPRSS15P98073 1019 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 PURAQ00577 322 aaKnown RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 HIF1AQ16665 826 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 RINLQ6ZS11 566 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 NLRP8Q86W28 1048 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 SYNPOQ8N3V7 929 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 SLC7A14Q8TBB6 771 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 RUNDC1Q96C34 613 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms