RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SEPT4O43236 478 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 PRC1O43663 620 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 PGK1P00558 417 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 PARP1P09874 1014 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 CPA1P15085 419 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 RXRAP19793 462 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 TRDNQ13061 729 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 LRRC26Q2I0M4 334 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 MAMDC4Q6UXC1 1216 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 ARMCX2Q7L311 632 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 NECAB2Q7Z6G3 386 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 CCDC144CPQ8IYA2 1237 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 C11orf49Q9H6J7 331 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 MCM3APO60318 1980 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 LAMA2P24043 3122 aaKnown RBP13.33□□□□□ -0.27
RAPGEF1-207ENST00000481260 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 CYTH3O43739 400 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 FDX1P10109 184 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 TROAPQ12815 778 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 GRM4Q14833 912 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 WTAPQ15007 396 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 EEPD1Q7L9B9 569 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 PIBF1Q8WXW3 757 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 PDGFCQ9NRA1 345 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 SLC5A4Q9NY91 659 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 COL20A1Q9P218 1284 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
RAPGEF1-207ENST00000481260 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 KLRF2D3W0D1 207 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 OPLAHO14841 1288 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 CALML3P27482 149 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 LRRC41Q15345 812 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 TKFCQ3LXA3 575 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 FBXO16Q8IX29 292 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 CMTR1Q8N1G2 835 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 SYNGAP1Q96PV0 1343 aa13.32□□□□□ -0.28
RAPGEF1-207ENST00000481260 LRRC37A2A6NM11 1700 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 DHX16O60231 1041 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 PLEKHA8P1O95397 391 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 RPS6P62753 249 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 ACVR2BQ13705 512 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 MTMR8Q96EF0 704 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 PIGSQ96S52 555 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-207ENST00000481260 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 CTAGE5O15320 804 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 SYN1P17600 705 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 ADCYAP1R1P41586 468 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 NT5C2P49902 561 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 HOMER1Q86YM7 354 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 WDR19Q8NEZ3 1342 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
RAPGEF1-207ENST00000481260 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 DNM1LO00429 736 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 EVI5O60447 810 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 MCM5P33992 734 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 ALDH5A1P51649 535 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 RNF207Q6ZRF8 634 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 TRIOBPQ9H2D6 2365 aa13.29□□□□□ -0.28
RAPGEF1-207ENST00000481260 MSCO60682 206 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 RARBP10826 455 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 AKR1A1P14550 325 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 SMPD1P17405 629 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 BEX3Q00994 111 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms