RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 MCM6Q14566 821 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 PANK4Q9NVE7 773 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 SUGT1Q9Y2Z0 365 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 COL15A1P39059 1388 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 PPP6R2O75170 966 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 ZNF75DP51815 510 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 HADHQ16836 314 aaKnown RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 KMT5BQ4FZB7 885 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 SYDE2Q5VT97 1194 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 ABI1Q8IZP0 508 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 C2orf69Q8N8R5 385 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 HAUS1Q96CS2 278 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 TBC1D31Q96DN5 1066 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 CAPZA3Q96KX2 299 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 CEP63Q96MT8 703 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 TRIM7Q9C029 511 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 YY1AP1Q9H869 796 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 TAB2Q9NYJ8 693 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 TPCN1Q9ULQ1 816 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 GIPC1O14908 333 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 GOLGA8HP0CJ92 632 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 CCND2P30279 289 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 C8orf74Q6P047 294 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 AFAP1L2Q8N4X5 818 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 TBC1D7Q9P0N9 293 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 SRP68Q9UHB9 627 aaKnown RBP10.41□□□□□ -0.74
GARNL3-216ENST00000481242 COPB2P35606 906 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 PTGDRQ13258 359 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 ALCAMQ13740 583 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 RPS6KA1Q15418 735 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 RC3H1Q5TC82 1133 aaKnown RBP10.41□□□□□ -0.74
GARNL3-216ENST00000481242 SYT10Q6XYQ8 523 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 SND1Q7KZF4 910 aaKnown RBP eCLIP10.41□□□□□ -0.74
GARNL3-216ENST00000481242 SRGAP1Q7Z6B7 1085 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 CCDC25Q86WR0 208 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 CBX8Q9HC52 389 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 ABCC12Q96J65 1359 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 LRRIQ4A6NIV6 560 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 RAD51AP2Q09MP3 1159 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 ELMSAN1Q6PJG2 1045 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 APOBEC3FQ8IUX4 373 aaKnown RBP10.41□□□□□ -0.74
GARNL3-216ENST00000481242 IFT20Q8IY31 132 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 CCDC110Q8TBZ0 833 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 CERKQ8TCT0 537 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 USP28Q96RU2 1077 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 ZNF577Q9BSK1 485 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 RIC8AQ9NPQ8 531 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 PRKAG2Q9UGJ0 569 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 CYP21A2P08686 494 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 RCAN1P53805 252 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 KRBA2Q6ZNG9 492 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 IFT81Q8WYA0 676 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 PARP2Q9UGN5 583 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 MTMR6Q9Y217 621 aa10.41□□□□□ -0.74
GARNL3-216ENST00000481242 BZW2Q9Y6E2 419 aaKnown RBP10.41□□□□□ -0.74
GARNL3-216ENST00000481242 ADGRB3O60242 1522 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 TLR3O15455 904 aaKnown RBP10.4□□□□□ -0.74
GARNL3-216ENST00000481242 SURF1Q15526 300 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 CFAP221Q4G0U5 840 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 PEX26Q7Z412 305 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 CCT6BQ92526 530 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 TMEM206Q9H813 350 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 HOXC10Q9NYD6 342 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 IQCA1LA6NCM1 817 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 PRPF3O43395 683 aaKnown RBP10.4□□□□□ -0.74
GARNL3-216ENST00000481242 CYP2J2P51589 502 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 MXRA7P84157 204 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 SLC39A14Q15043 492 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 CFAP157Q5JU67 520 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 DCAF4Q8WV16 495 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 ATRIPQ8WXE1 791 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 TRERF1Q96PN7 1200 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 TMEM63CQ9P1W3 806 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 AP3B2Q13367 1082 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 RASA3Q14644 834 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 VPS72Q15906 364 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 FAM182BQ5T319 152 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 CACTINQ8WUQ7 758 aaKnown RBP10.4□□□□□ -0.74
GARNL3-216ENST00000481242 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.74
GARNL3-216ENST00000481242 ZNF341Q9BYN7 854 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 FAM184BQ9ULE4 1060 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 NUB1Q9Y5A7 615 aa10.4□□□□□ -0.74
GARNL3-216ENST00000481242 CAPN9O14815 690 aa10.4□□□□□ -0.75
GARNL3-216ENST00000481242 RASGRF1Q13972 1273 aa10.4□□□□□ -0.75
GARNL3-216ENST00000481242 TXNRD1Q16881 649 aa10.4□□□□□ -0.75
GARNL3-216ENST00000481242 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.75
GARNL3-216ENST00000481242 GSDMBQ8TAX9 411 aa10.4□□□□□ -0.75
GARNL3-216ENST00000481242 POLR3EQ9NVU0 708 aa10.4□□□□□ -0.75
GARNL3-216ENST00000481242 TLDC2A0PJX2 215 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 PTPREP23469 700 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 MECOMQ03112 1051 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 ITIH3Q06033 890 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 RUFY4Q6ZNE9 571 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 HDXQ7Z353 690 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 LARP4BQ92615 738 aaKnown RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 PALD1Q9ULE6 856 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms