RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 PMLP29590 882 aa3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 SMAD4Q13485 552 aaKnown RBP3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 NBPF12Q5TAG4 269 aaPredicted RBP3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 PLEKHH3Q7Z736 793 aa3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 TXNDC2Q86VQ3 553 aa3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 SEMA4AQ9H3S1 761 aa3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 CD248Q9HCU0 757 aa3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 BIN2Q9UBW5 565 aaPredicted RBP3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 MINPP1Q9UNW1 487 aa3.78□□□□□ -1.8
R3HDM1-214ENST00000480793 PRR36Q9H6K5 1346 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 NPEPPSL1A6NEC2 478 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 HTR3BO95264 441 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 ATXN1P54253 815 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 NANOS3P60323 173 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 ABHD18Q0P651 414 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 MLECQ14165 292 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 SPDYAQ5MJ70 313 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 CCDC84Q86UT8 332 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 CIR1Q86X95 450 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 TMEM52Q8NDY8 209 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 FRMD6Q96NE9 622 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 PPP4R1LQ9P1A2 415 aa3.77□□□□□ -1.81
R3HDM1-214ENST00000480793 NPIPB8E9PQR5 432 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 UBOX5O94941 541 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 VAV1P15498 845 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 RAG1P15918 1043 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 EIF4BP23588 611 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 TACR1P25103 407 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 RPL13P26373 211 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 CORO7P57737 925 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 FMR1Q06787 632 aaKnown RBP eCLIP3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 CACNB2Q08289 660 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 RAD51AP2Q09MP3 1159 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 USP48Q86UV5 1035 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 DNAJC10Q8IXB1 793 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 CPA5Q8WXQ8 436 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 TSPAN17Q96FV3 270 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 CEP89Q96ST8 783 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 ARID3AQ99856 593 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 WWC3Q9ULE0 1092 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 TLR6Q9Y2C9 796 aa3.76□□□□□ -1.81
R3HDM1-214ENST00000480793 SOWAHDA6NJG2 315 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 DNAJA2O60884 412 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 LMO1P25800 156 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 MCTP2Q6DN12 878 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 CRTC3Q6UUV7 619 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 CYP2R1Q6VVX0 501 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 BNC2Q6ZN30 1099 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 CABP7Q86V35 215 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 LINC00482Q8N8I6 264 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 LCORQ96JN0 433 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 BCAS3Q9H6U6 928 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 GFOD1Q9NXC2 390 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 TESMINQ9Y4I5 508 aa3.75□□□□□ -1.81
R3HDM1-214ENST00000480793 GSTM1P09488 218 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 CYP2C8P10632 490 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 THBS2P35442 1172 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 CTSKP43235 329 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 TRIM26Q12899 539 aaPredicted RBP3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 R3HDM1Q15032 1099 aaKnown RBP3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 ARSHQ5FYA8 562 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 RTP2Q5QGT7 225 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 CDCP2Q5VXM1 449 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 C9orf131Q5VYM1 1079 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 TXNDC5Q8NBS9 432 aaKnown RBP3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 DNERQ8NFT8 737 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 GATAD2BQ8WXI9 593 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 DDX11Q96FC9 970 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 PCDH18Q9HCL0 1135 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 NUDT5Q9UKK9 219 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 FBXL21Q9UKT6 434 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 PCDHB12Q9Y5F1 795 aa3.74□□□□□ -1.81
R3HDM1-214ENST00000480793 GPR42O15529 346 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 CLEC3AO75596 197 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 GSNP06396 782 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 DPTQ07507 201 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 SLC9A5Q14940 896 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 ZSCAN29Q8IWY8 852 aaPredicted RBP3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 RGS22Q8NE09 1264 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 IGDCC4Q8TDY8 1250 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 ZNF512BQ96KM6 892 aaPredicted RBP3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 CRAMP1Q96RY5 1269 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 DSCC1Q9BVC3 393 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 MKRN2Q9H000 416 aaKnown RBP3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 IKZF4Q9H2S9 585 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 RXFP1Q9HBX9 757 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 JADE2Q9NQC1 790 aa3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 POLR3KQ9Y2Y1 108 aaPredicted RBP3.73□□□□□ -1.81
R3HDM1-214ENST00000480793 FAM221AA4D161 298 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 C9orf118A6NHY6 69 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 B4GALT3O60512 393 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 ZNF202O95125 648 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 F13A1P00488 732 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 GLI4P10075 376 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 FOXE3Q13461 319 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 CWF19L1Q69YN2 538 aaKnown RBP3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 AMER2Q8N7J2 671 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 PHC3Q8NDX5 983 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 PEX11GQ96HA9 241 aa3.72□□□□□ -1.81
R3HDM1-214ENST00000480793 GORASP1Q9BQQ3 440 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms