RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
LIMS4-202ENST00000480598 TNKSO95271 1327 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 A0A1W2PQ45 241 aaPredicted RBP17.47■□□□□ 0.39
LIMS4-202ENST00000480598 A0A1W2PQY0 241 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 SOX1O00570 391 aaPredicted RBP17.47■□□□□ 0.39
LIMS4-202ENST00000480598 DUSP11O75319 330 aaKnown RBP17.47■□□□□ 0.39
LIMS4-202ENST00000480598 NT5C2P49902 561 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 CCDC178Q5BJE1 867 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 KLHDC9Q8NEP7 349 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 ANKS1AQ92625 1134 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 KRT23Q9C075 422 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 UBE2OQ9C0C9 1292 aaKnown RBP17.47■□□□□ 0.39
LIMS4-202ENST00000480598 UBA5Q9GZZ9 404 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 KAT14Q9H8E8 782 aa17.47■□□□□ 0.39
LIMS4-202ENST00000480598 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.46■□□□□ 0.39
LIMS4-202ENST00000480598 ASB14A6NK59 587 aa17.46■□□□□ 0.39
LIMS4-202ENST00000480598 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
LIMS4-202ENST00000480598 GPATCH4Q5T3I0 446 aaKnown RBP17.46■□□□□ 0.39
LIMS4-202ENST00000480598 CLEC4DQ8WXI8 215 aa17.46■□□□□ 0.39
LIMS4-202ENST00000480598 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
LIMS4-202ENST00000480598 PRDM5Q9NQX1 630 aaPredicted RBP17.46■□□□□ 0.39
LIMS4-202ENST00000480598 LTBP2Q14767 1821 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 C6orf222P0C671 652 aaPredicted RBP17.45■□□□□ 0.38
LIMS4-202ENST00000480598 PTGS1P23219 599 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 ACLYP53396 1101 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 KCNA10Q16322 511 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 CCSAPQ6IQ19 270 aaPredicted RBP17.45■□□□□ 0.38
LIMS4-202ENST00000480598 SLC30A10Q6XR72 485 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 EEPD1Q7L9B9 569 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 TDHQ8IZJ6 230 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 LRCH3Q96II8 777 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 TSEN34Q9BSV6 310 aaKnown RBP17.45■□□□□ 0.38
LIMS4-202ENST00000480598 PRKAG2Q9UGJ0 569 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 TAF6LQ9Y6J9 622 aa17.45■□□□□ 0.38
LIMS4-202ENST00000480598 PTPDC1A2A3K4 754 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 SGSM2O43147 1006 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 CYP21A2P08686 494 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 TLE2Q04725 743 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 USH1GQ495M9 461 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 C1orf53Q5VUE5 145 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 FBXO16Q8IX29 292 aaPredicted RBP17.44■□□□□ 0.38
LIMS4-202ENST00000480598 LBHD1Q9BQE6 289 aaPredicted RBP17.44■□□□□ 0.38
LIMS4-202ENST00000480598 UPF3AQ9H1J1 476 aaKnown RBP17.44■□□□□ 0.38
LIMS4-202ENST00000480598 PDLIM7Q9NR12 457 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 PDGFCQ9NRA1 345 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 WDR19Q8NEZ3 1342 aa17.44■□□□□ 0.38
LIMS4-202ENST00000480598 PQBP1O60828 265 aaKnown RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 CALML3P27482 149 aa17.43■□□□□ 0.38
LIMS4-202ENST00000480598 CST5P28325 142 aaPredicted RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 ALDH5A1P51649 535 aaPredicted RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 GJA9P57773 515 aa17.43■□□□□ 0.38
LIMS4-202ENST00000480598 TNFAIP2Q03169 654 aa17.43■□□□□ 0.38
LIMS4-202ENST00000480598 CDC37Q16543 378 aaPredicted RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
LIMS4-202ENST00000480598 SPC25Q9HBM1 224 aa17.43■□□□□ 0.38
LIMS4-202ENST00000480598 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
LIMS4-202ENST00000480598 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
LIMS4-202ENST00000480598 TRIM43BA6NCK2 446 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 CTAGE5O15320 804 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 PARP1P09874 1014 aaKnown RBP17.42■□□□□ 0.38
LIMS4-202ENST00000480598 BEX3Q00994 111 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 SEC23AQ15436 765 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 TAPT1Q6NXT6 567 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 RNF207Q6ZRF8 634 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 MORC4Q8TE76 937 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 TRIM43Q96BQ3 446 aaPredicted RBP17.42■□□□□ 0.38
LIMS4-202ENST00000480598 PNMA2Q9UL42 364 aa17.42■□□□□ 0.38
LIMS4-202ENST00000480598 GNEQ9Y223 722 aaKnown RBP17.42■□□□□ 0.38
LIMS4-202ENST00000480598 ASGR1P07306 291 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 SMPD1P17405 629 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
LIMS4-202ENST00000480598 TRDNQ13061 729 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 GNASQ5JWF2 1037 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 STOX1Q6ZVD7 989 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 TLK2Q86UE8 772 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 STAG2Q8N3U4 1231 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 PCSK9Q8NBP7 692 aaKnown RBP17.41■□□□□ 0.38
LIMS4-202ENST00000480598 NUP133Q8WUM0 1156 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 BADQ92934 168 aa17.41■□□□□ 0.38
LIMS4-202ENST00000480598 ADD3Q9UEY8 706 aaKnown RBP17.41■□□□□ 0.38
LIMS4-202ENST00000480598 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
LIMS4-202ENST00000480598 CLTBP09497 229 aa17.4■□□□□ 0.38
LIMS4-202ENST00000480598 ITGB8P26012 769 aa17.4■□□□□ 0.38
LIMS4-202ENST00000480598 GLT1D1Q96MS3 346 aa17.4■□□□□ 0.38
LIMS4-202ENST00000480598 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
LIMS4-202ENST00000480598 VAT1LQ9HCJ6 419 aa17.4■□□□□ 0.38
LIMS4-202ENST00000480598 VTA1Q9NP79 307 aa17.4■□□□□ 0.38
LIMS4-202ENST00000480598 E7EWF7 191 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms