RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 UBE2SQ16763 222 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 PAXIP1Q6ZW49 1069 aaPredicted RBP15.09■□□□□ 0.01
CHD3-210ENST00000479080 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 DIS3L2Q8IYB7 885 aaKnown RBP15.09■□□□□ 0.01
CHD3-210ENST00000479080 RGS22Q8NE09 1264 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 CHMP5Q9NZZ3 219 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 CCPG1Q9ULG6 757 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 SMCO2A6NFE2 343 aa15.08■□□□□ 0
CHD3-210ENST00000479080 MEIS2O14770 477 aa15.08■□□□□ 0
CHD3-210ENST00000479080 EDIL3O43854 480 aa15.08■□□□□ 0
CHD3-210ENST00000479080 F13A1P00488 732 aa15.08■□□□□ 0
CHD3-210ENST00000479080 FDX1P10109 184 aa15.08■□□□□ 0
CHD3-210ENST00000479080 PDCP20941 246 aa15.08■□□□□ 0
CHD3-210ENST00000479080 CLK2P49760 499 aaKnown RBP15.08■□□□□ 0
CHD3-210ENST00000479080 OAZ1P54368 228 aa15.08■□□□□ 0
CHD3-210ENST00000479080 GHRHRQ02643 423 aa15.08■□□□□ 0
CHD3-210ENST00000479080 NOGQ13253 232 aa15.08■□□□□ 0
CHD3-210ENST00000479080 SNRNP48Q6IEG0 339 aaKnown RBP15.08■□□□□ 0
CHD3-210ENST00000479080 FAM173BQ6P4H8 233 aa15.08■□□□□ 0
CHD3-210ENST00000479080 PAGR1Q9BTK6 254 aa15.08■□□□□ 0
CHD3-210ENST00000479080 MOV10L1Q9BXT6 1211 aaKnown RBP15.08■□□□□ 0
CHD3-210ENST00000479080 ZCCHC17Q9NP64 241 aaKnown RBP15.08■□□□□ 0
CHD3-210ENST00000479080 TMEM260Q9NX78 707 aa15.08■□□□□ 0
CHD3-210ENST00000479080 PCDHA4Q9UN74 947 aa15.08■□□□□ 0
CHD3-210ENST00000479080 KIF3AQ9Y496 699 aa15.08■□□□□ 0
CHD3-210ENST00000479080 ABCB11O95342 1321 aa15.08■□□□□ 0
CHD3-210ENST00000479080 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
CHD3-210ENST00000479080 WNT7AO00755 349 aa15.07■□□□□ 0
CHD3-210ENST00000479080 BCRP11274 1271 aa15.07■□□□□ 0
CHD3-210ENST00000479080 ALAS1P13196 640 aa15.07■□□□□ 0
CHD3-210ENST00000479080 U2AF2P26368 475 aaKnown RBP eCLIP15.07■□□□□ 0
CHD3-210ENST00000479080 NLRP5P59047 1200 aa15.07■□□□□ 0
CHD3-210ENST00000479080 RIOX2Q8IUF8 465 aa15.07■□□□□ 0
CHD3-210ENST00000479080 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
CHD3-210ENST00000479080 MB21D1Q8N884 522 aa15.07■□□□□ 0
CHD3-210ENST00000479080 TEX13BQ9BXU2 312 aa15.07■□□□□ 0
CHD3-210ENST00000479080 SPATC1LQ9H0A9 340 aa15.07■□□□□ 0
CHD3-210ENST00000479080 RIC8AQ9NPQ8 531 aa15.07■□□□□ 0
CHD3-210ENST00000479080 RNF146Q9NTX7 359 aa15.07■□□□□ 0
CHD3-210ENST00000479080 MORF4L1Q9UBU8 362 aa15.07■□□□□ 0
CHD3-210ENST00000479080 PNMA3Q9UL41 463 aa15.07■□□□□ 0
CHD3-210ENST00000479080 PCDHA6Q9UN73 950 aa15.07■□□□□ 0
CHD3-210ENST00000479080 RABGAP1Q9Y3P9 1069 aa15.07■□□□□ 0
CHD3-210ENST00000479080 PCDHA8Q9Y5H6 950 aa15.07■□□□□ 0
CHD3-210ENST00000479080 H3BQV1 296 aa15.06■□□□□ 0
CHD3-210ENST00000479080 STAT3P40763 770 aa15.06■□□□□ 0
CHD3-210ENST00000479080 ADCY7P51828 1080 aa15.06■□□□□ 0
CHD3-210ENST00000479080 ERVK-9P63128 1117 aa15.06■□□□□ 0
CHD3-210ENST00000479080 ERVK-24P63145 666 aa15.06■□□□□ 0
CHD3-210ENST00000479080 SREBF2Q12772 1141 aa15.06■□□□□ 0
CHD3-210ENST00000479080 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
CHD3-210ENST00000479080 BLIDQ8IZY5 108 aa15.06■□□□□ 0
CHD3-210ENST00000479080 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
CHD3-210ENST00000479080 PGBD1Q96JS3 809 aa15.06■□□□□ 0
CHD3-210ENST00000479080 PARK7Q99497 189 aaKnown RBP15.06■□□□□ 0
CHD3-210ENST00000479080 PORCNQ9H237 461 aa15.06■□□□□ 0
CHD3-210ENST00000479080 HOMER2Q9NSB8 354 aa15.06■□□□□ 0
CHD3-210ENST00000479080 COL20A1Q9P218 1284 aa15.06■□□□□ 0
CHD3-210ENST00000479080 KRT2P35908 639 aa15.05■□□□□ -0
CHD3-210ENST00000479080 HSD17B4P51659 736 aa15.05■□□□□ -0
CHD3-210ENST00000479080 INHBEP58166 350 aa15.05■□□□□ -0
CHD3-210ENST00000479080 NUCB2P80303 420 aa15.05■□□□□ -0
CHD3-210ENST00000479080 TRIM29Q14134 588 aa15.05■□□□□ -0
CHD3-210ENST00000479080 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ -0
CHD3-210ENST00000479080 SLC30A10Q6XR72 485 aa15.05■□□□□ -0
CHD3-210ENST00000479080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ -0
CHD3-210ENST00000479080 ANKRD13CQ8N6S4 541 aa15.05■□□□□ -0
CHD3-210ENST00000479080 TRERF1Q96PN7 1200 aa15.05■□□□□ -0
CHD3-210ENST00000479080 FOXP1Q9H334 677 aaPredicted RBP15.05■□□□□ -0
CHD3-210ENST00000479080 BIN2Q9UBW5 565 aaPredicted RBP15.05■□□□□ -0
CHD3-210ENST00000479080 CPA4Q9UI42 421 aa15.05■□□□□ -0
CHD3-210ENST00000479080 MRPL11Q9Y3B7 192 aaKnown RBP15.05■□□□□ -0
CHD3-210ENST00000479080 RBBP6Q7Z6E9 1792 aaKnown RBP15.05■□□□□ -0
CHD3-210ENST00000479080 LCTP09848 1927 aa15.05■□□□□ -0
CHD3-210ENST00000479080 HSPA6P17066 643 aa15.04■□□□□ -0
CHD3-210ENST00000479080 XBP1P17861 261 aa15.04■□□□□ -0
CHD3-210ENST00000479080 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
CHD3-210ENST00000479080 TOB1P50616 345 aaPredicted RBP15.04■□□□□ -0
CHD3-210ENST00000479080 CRHR2Q13324 411 aa15.04■□□□□ -0
CHD3-210ENST00000479080 C17orf99Q6UX52 265 aa15.04■□□□□ -0
CHD3-210ENST00000479080 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
CHD3-210ENST00000479080 TNPO1Q92973 898 aaKnown RBP15.04■□□□□ -0
CHD3-210ENST00000479080 PURBQ96QR8 312 aaKnown RBP15.04■□□□□ -0
CHD3-210ENST00000479080 PSTPIP2Q9H939 334 aa15.04■□□□□ -0
CHD3-210ENST00000479080 C6orf50Q9HD87 102 aa15.04■□□□□ -0
CHD3-210ENST00000479080 ASTN1O14525 1302 aa15.03■□□□□ -0
CHD3-210ENST00000479080 PIK3CDO00329 1044 aa15.03■□□□□ -0
CHD3-210ENST00000479080 ERCC3P19447 782 aa15.03■□□□□ -0
CHD3-210ENST00000479080 CALML3P27482 149 aa15.03■□□□□ -0
CHD3-210ENST00000479080 GCLCP48506 637 aaPredicted RBP15.03■□□□□ -0
CHD3-210ENST00000479080 CAP1Q01518 475 aa15.03■□□□□ -0
CHD3-210ENST00000479080 PLS1Q14651 629 aa15.03■□□□□ -0
CHD3-210ENST00000479080 FAM110CQ1W6H9 321 aa15.03■□□□□ -0
CHD3-210ENST00000479080 TKFCQ3LXA3 575 aa15.03■□□□□ -0
CHD3-210ENST00000479080 JAKMIP3Q5VZ66 844 aa15.03■□□□□ -0
CHD3-210ENST00000479080 MCTP1Q6DN14 999 aa15.03■□□□□ -0
CHD3-210ENST00000479080 GALNT17Q6IS24 598 aa15.03■□□□□ -0
CHD3-210ENST00000479080 NOSTRINQ8IVI9 506 aa15.03■□□□□ -0
CHD3-210ENST00000479080 SMCR8Q8TEV9 937 aaPredicted RBP15.03■□□□□ -0
CHD3-210ENST00000479080 GTF3C2Q8WUA4 911 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms