RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	TMTC3	Q6ZXV5	915 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	DPP9	Q86TI2	863 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	RAB11FIP4	Q86YS3	637 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	FANCB	Q8NB91	859 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	CLEC4D	Q8WXI8	215 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	TRERF1	Q96PN7	1200 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	A1CF	Q9NQ94	594 aa	Known RBP	11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	RBM28	Q9NW13	759 aa	Known RBP	11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	SLC5A4	Q9NY91	659 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	FLRT1	Q9NZU1	646 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	DIS3	Q9Y2L1	958 aa	Known RBP	11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	PFAS	O15067	1338 aa		11.02	□□□□□ -0.65
SFI1-222	ENST00000478887	GOLGA8A	A7E2F4	631 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	NFIB	O00712	420 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	PPP1R11	O60927	126 aa	Predicted RBP	11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	PGK2	P07205	417 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	UBXN2A	P68543	259 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	FUT2	Q10981	343 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	RTN1	Q16799	776 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	FBXO11	Q86XK2	927 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	CCDC144CP	Q8IYA2	1237 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	ANKRD35	Q8N283	1001 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	SRBD1	Q8N5C6	995 aa	Known RBP	11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	MAML3	Q96JK9	1138 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	FGD4	Q96M96	766 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	PIGS	Q96S52	555 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	AMN	Q9BXJ7	453 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	MAF1	Q9H063	256 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	VAT1L	Q9HCJ6	419 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	PDRG1	Q9NUG6	133 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	ABCB11	O95342	1321 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	CNTNAP5	Q8WYK1	1306 aa		11.01	□□□□□ -0.65
SFI1-222	ENST00000478887	PNMA6F	A0A0J9YX94	578 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	CDC27	P30260	824 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	RBM25	P49756	843 aa	Known RBP	11	□□□□□ -0.65
SFI1-222	ENST00000478887	METAP2	P50579	478 aa	Known RBP eCLIP	11	□□□□□ -0.65
SFI1-222	ENST00000478887	TRIM32	Q13049	653 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	TRAF1	Q13077	416 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	PPP2R5B	Q15173	497 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	MTFR1	Q15390	333 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	USH1G	Q495M9	461 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11	□□□□□ -0.65
SFI1-222	ENST00000478887	HOMER1	Q86YM7	354 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	FAM133A	Q8N9E0	248 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	RGS22	Q8NE09	1264 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	DDX11	Q96FC9	970 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	CYP39A1	Q9NYL5	469 aa		11	□□□□□ -0.65
SFI1-222	ENST00000478887	CCDC196	A0A1B0GTZ2	297 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	POTEB2	H3BUK9	544 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	OPLAH	O14841	1288 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	CCL5	P13501	91 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	PRKAR2A	P13861	404 aa	Known RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	PDIA3	P30101	505 aa	Known RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	GHRHR	Q02643	423 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	CACNB2	Q08289	660 aa	Predicted RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	MFSD14C	Q5VZR4	134 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	MAMDC4	Q6UXC1	1216 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	NSMF	Q6X4W1	530 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	MSL3	Q8N5Y2	521 aa	Known RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	RRP36	Q96EU6	259 aa	Known RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	ZNF274	Q96GC6	653 aa	Predicted RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	KIF2C	Q99661	725 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	C22orf23	Q9BZE7	217 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	BIN2	Q9UBW5	565 aa	Predicted RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	MRPL11	Q9Y3B7	192 aa	Known RBP	10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	SYNGAP1	Q96PV0	1343 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	DOCK3	Q8IZD9	2030 aa		10.99	□□□□□ -0.65
SFI1-222	ENST00000478887	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	SOWAHB	A6NEL2	793 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	CCDC85C	A6NKD9	419 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	CYBA	P13498	195 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	CYP2C19	P33261	490 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	RPS6	P62753	249 aa	Known RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	CNTN2	Q02246	1040 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	SLC30A10	Q6XR72	485 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	RNF207	Q6ZRF8	634 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	CMTR1	Q8N1G2	835 aa	Known RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	TINF2	Q9BSI4	451 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	UNC93B1	Q9H1C4	597 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	UPF2	Q9HAU5	1272 aa	Known RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	PAK6	Q9NQU5	681 aa	Predicted RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	SEC63	Q9UGP8	760 aa	Known RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	NRBP1	Q9UHY1	535 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	PCDHA1	Q9Y5I3	950 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	ASTN1	O14525	1302 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	RPTOR	Q8N122	1335 aa		10.98	□□□□□ -0.65
SFI1-222	ENST00000478887	LOC102724159	A0A0B4J2E5	919 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	PTPDC1	A2A3K4	754 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	GJB1	P08034	283 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	ADD1	P35611	737 aa	Known RBP	10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	HSD17B4	P51659	736 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	AK2	P54819	239 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	BAAT	Q14032	418 aa	Predicted RBP	10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	PWP2	Q15269	919 aa	Known RBP	10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	ANKRD1	Q15327	319 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	NTRK3	Q16288	839 aa		10.97	□□□□□ -0.65
SFI1-222	ENST00000478887	MCF2L2	Q86YR7	1114 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms