RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 YIPF3Q9GZM5 350 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 FOXP1Q9H334 677 aaPredicted RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 RWDD2AQ9UIY3 292 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 TARSL2A2RTX5 802 aaKnown RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 AENQ8WTP8 325 aaKnown RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 CYFIP2Q96F07 1278 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 KCNK3O14649 394 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 PBX1P40424 430 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 MDH1P40925 334 aaKnown RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 KIF11P52732 1056 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 KIF9Q9HAQ2 790 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 TPX2Q9ULW0 747 aaKnown RBP12.63□□□□□ -0.39
GFM1-207ENST00000478254 JAG2Q9Y219 1238 aa12.63□□□□□ -0.39
GFM1-207ENST00000478254 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 ZNF233A6NK53 670 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 KIF1CO43896 1103 aaKnown RBP12.62□□□□□ -0.39
GFM1-207ENST00000478254 LLGL1Q15334 1064 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
GFM1-207ENST00000478254 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 ORAI2Q96SN7 254 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 JCADQ9P266 1359 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 TNKSO95271 1327 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 EPS15P42566 896 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 MMP14P50281 582 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 HLFQ16534 295 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 HAUS3Q68CZ6 603 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 RMND1Q9NWS8 449 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 TBC1D7Q9P0N9 293 aa12.62□□□□□ -0.39
GFM1-207ENST00000478254 LIMA1Q9UHB6 759 aaKnown RBP12.62□□□□□ -0.39
GFM1-207ENST00000478254 UTYO14607 1347 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 LGALS16A8MUM7 142 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 H7C1D1 291 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 MARCH6O60337 910 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ADD2P35612 726 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 DNM2P50570 870 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 SATB1Q01826 763 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ADCY1Q08828 1119 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 QPCTQ16769 361 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 SPRED3Q2MJR0 410 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 AATFQ9NY61 560 aaKnown RBP eCLIP12.61□□□□□ -0.39
GFM1-207ENST00000478254 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 SLCO1A2P46721 670 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 ALS2CLQ60I27 953 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ANKLE2Q86XL3 938 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 STAMBPL1Q96FJ0 436 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 NOX5Q96PH1 765 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 KRT23Q9C075 422 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
GFM1-207ENST00000478254 GTPBP6O43824 516 aaPredicted RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 FCER1AP12319 257 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ITGA6P23229 1130 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 RAPGEF1Q13905 1077 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 LRRC41Q15345 812 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 CCDC170Q8IYT3 715 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
GFM1-207ENST00000478254 HVCN1Q96D96 273 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ZBTB10Q96DT7 871 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 VCPKMTQ9H867 229 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 MLXIPLQ9NP71 852 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 CPDO75976 1380 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 MYH8P13535 1937 aa12.61□□□□□ -0.39
GFM1-207ENST00000478254 ZC3H4Q9UPT8 1303 aaKnown RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 GMNCA6NCL1 334 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 NMT2O60551 498 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 SLC1A4P43007 532 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 LCORLQ8N3X6 602 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 PALMO75781 387 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 TCP1P17987 556 aaKnown RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 NT5DC1Q5TFE4 455 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 GKAP1Q5VSY0 366 aaPredicted RBP12.6□□□□□ -0.39
GFM1-207ENST00000478254 FMNL3Q8IVF7 1028 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 KCNH5Q8NCM2 988 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 ATP6V1G3Q96LB4 118 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 CAPN11Q9UMQ6 739 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 DNM1LO00429 736 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 CYP7A1P22680 504 aa12.6□□□□□ -0.39
GFM1-207ENST00000478254 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms