RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 TFF2Q03403 129 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.92■□□□□ 0.3
RC3H2-208ENST00000478216 GMCL1P1Q8NEA9 526 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 SCLYQ96I15 445 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 C1QTNF1Q9BXJ1 281 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 KATNBL1Q9H079 304 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 A1CFQ9NQ94 594 aaKnown RBP16.92■□□□□ 0.3
RC3H2-208ENST00000478216 PCDHA11Q9Y5I1 949 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 ASTN1O14525 1302 aa16.92■□□□□ 0.3
RC3H2-208ENST00000478216 GSG1L2A8MUP6 293 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 FDX1P10109 184 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 FBXO16Q8IX29 292 aaPredicted RBP16.91■□□□□ 0.3
RC3H2-208ENST00000478216 FAM133AQ8N9E0 248 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 AGBL1Q96MI9 1066 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 TRERF1Q96PN7 1200 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 SEZ6LQ9BYH1 1024 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 WNT8AQ9H1J5 351 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
RC3H2-208ENST00000478216 SOWAHBA6NEL2 793 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
RC3H2-208ENST00000478216 SMPD1P17405 629 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 PTGS1P23219 599 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 SLC1A4P43007 532 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 DEFB128Q7Z7B8 93 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 SLC43A3Q8NBI5 491 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 APPBP2Q92624 585 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 GPATCH3Q96I76 525 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
RC3H2-208ENST00000478216 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 SYNPO2Q9UMS6 1093 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 MTMR7Q9Y216 660 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
RC3H2-208ENST00000478216 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
RC3H2-208ENST00000478216 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
RC3H2-208ENST00000478216 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 GPAA1O43292 621 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
RC3H2-208ENST00000478216 ACTN1P12814 892 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 GNAT2P19087 354 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 KCNQ1P51787 676 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 NKX3-2P78367 333 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 PDE4BQ07343 736 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 FAM47CQ5HY64 1035 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
RC3H2-208ENST00000478216 PDGFCQ9NRA1 345 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
RC3H2-208ENST00000478216 CA3P07451 260 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 PFKMP08237 780 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 MYL3P08590 195 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 SUPT20HL2P0C7V6 817 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 SNAP25P60880 206 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 IQSEC1Q6DN90 963 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 OSBP2Q969R2 916 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 MKL1Q969V6 931 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 ALDH8A1Q9H2A2 487 aaPredicted RBP16.88■□□□□ 0.29
RC3H2-208ENST00000478216 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
RC3H2-208ENST00000478216 HCN4Q9Y3Q4 1203 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 GRIN2DO15399 1336 aa16.88■□□□□ 0.29
RC3H2-208ENST00000478216 RFXAPO00287 272 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 RNF113AO15541 343 aaKnown RBP16.87■□□□□ 0.29
RC3H2-208ENST00000478216 CYP2C9P11712 490 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 MCCP23508 829 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 TFAP4Q01664 338 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 TTLL4Q14679 1199 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 KCTD1Q719H9 257 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 STAG1Q8WVM7 1258 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 FTOQ9C0B1 505 aaKnown RBP eCLIP16.87■□□□□ 0.29
RC3H2-208ENST00000478216 VTA1Q9NP79 307 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 TRMT13Q9NUP7 481 aaKnown RBP16.87■□□□□ 0.29
RC3H2-208ENST00000478216 POLR3EQ9NVU0 708 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 STX8Q9UNK0 236 aa16.87■□□□□ 0.29
RC3H2-208ENST00000478216 M0R2C6 588 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
RC3H2-208ENST00000478216 BMP1P13497 986 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 CCDC96Q2M329 555 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
RC3H2-208ENST00000478216 NEDD1Q8NHV4 660 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 ARNTL2Q8WYA1 636 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 NAPBQ9H115 298 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 CYP39A1Q9NYL5 469 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 NOD1Q9Y239 953 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 Q9Y3F1 56 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 ZNF536O15090 1300 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 TNKSO95271 1327 aa16.86■□□□□ 0.29
RC3H2-208ENST00000478216 TCF20Q9UGU0 1960 aaKnown RBP16.86■□□□□ 0.29
RC3H2-208ENST00000478216 ERC2O15083 957 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms