RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
MINDY3-206ENST00000477891 TRIM9Q9C026 710 aa11.84□□□□□ -0.51
MINDY3-206ENST00000477891 ZNF446Q9NWS9 450 aa11.84□□□□□ -0.51
MINDY3-206ENST00000477891 DDX41Q9UJV9 622 aaKnown RBP11.84□□□□□ -0.51
MINDY3-206ENST00000477891 ITIH6Q6UXX5 1313 aa11.84□□□□□ -0.51
MINDY3-206ENST00000477891 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 CCDC175P0C221 793 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 SNHG28P0DPA3 235 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 CASQ1P31415 396 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 ERVK-24P63145 666 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 MAP3K9P80192 1104 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 UBXN1Q04323 297 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 NFIAQ12857 509 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 STK4Q13043 487 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 APOBEC3HQ6NTF7 200 aaKnown RBP11.83□□□□□ -0.51
MINDY3-206ENST00000477891 ZFPM1Q8IX07 1006 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 AK8Q96MA6 479 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.51
MINDY3-206ENST00000477891 SLC37A4O43826 429 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 PPP1R11O60927 126 aaPredicted RBP11.83□□□□□ -0.52
MINDY3-206ENST00000477891 FCER1AP12319 257 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 SHMT1P34896 483 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 SPAG1Q07617 926 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 ARHGAP29Q52LW3 1261 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 CDC42EP5Q6NZY7 148 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
MINDY3-206ENST00000477891 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 HPS3Q969F9 1004 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
MINDY3-206ENST00000477891 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
MINDY3-206ENST00000477891 EPC1Q9H2F5 836 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
MINDY3-206ENST00000477891 LTBP1Q14766 1721 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 ESYT2A0FGR8 921 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 NKRFO15226 690 aaKnown RBP eCLIP11.82□□□□□ -0.52
MINDY3-206ENST00000477891 TDP2O95551 362 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 TTLL1O95922 423 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 MYL1P05976 194 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 H2AFXP16104 143 aaPredicted RBP11.82□□□□□ -0.52
MINDY3-206ENST00000477891 FECHP22830 423 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 SLC16A2P36021 539 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 DUSP9Q99956 384 aaKnown RBP11.82□□□□□ -0.52
MINDY3-206ENST00000477891 JMJD4Q9H9V9 463 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 OGFRQ9NZT2 677 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 TADA3O75528 432 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 KRT9P35527 623 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 ASPRV1Q53RT3 343 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 ANKRD40Q6AI12 368 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 ACRBPQ8NEB7 543 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 ZNF507Q8TCN5 953 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 CHP1Q99653 195 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 SUGT1Q9Y2Z0 365 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 PLIN4Q96Q06 1357 aa11.82□□□□□ -0.52
MINDY3-206ENST00000477891 TTC26A0AVF1 554 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 PSMA7O14818 248 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
MINDY3-206ENST00000477891 CACNB3P54284 484 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 PDE4DQ08499 809 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 ZNF543Q08ER8 600 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 UBE2SQ16763 222 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 SHROOM1Q2M3G4 852 aaPredicted RBP11.81□□□□□ -0.52
MINDY3-206ENST00000477891 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 MNS1Q8NEH6 495 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 UBXN4Q92575 508 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 GJA10Q969M2 543 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 C7orf25Q9BPX7 421 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 CUEDC2Q9H467 287 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 PES1O00541 588 aaKnown RBP11.81□□□□□ -0.52
MINDY3-206ENST00000477891 NPR1P16066 1061 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 ADCY7P51828 1080 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 ASIC1P78348 528 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 ATP2B2Q01814 1243 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 GRB10Q13322 594 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 CALCRLQ16602 461 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 KCTD1Q719H9 257 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 CCDC51Q96ER9 411 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 DBNDD1Q9H9R9 158 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 BLOC1S4Q9NUP1 217 aa11.81□□□□□ -0.52
MINDY3-206ENST00000477891 POTEMA6NI47 508 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 LGALS16A8MUM7 142 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 USP17L10C9JJH3 530 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 MPHOSPH10O00566 681 aaKnown RBP11.8□□□□□ -0.52
MINDY3-206ENST00000477891 CLCN6P51797 869 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 CSGALNACT2Q8N6G5 542 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 DHTKD1Q96HY7 919 aaPredicted RBP11.8□□□□□ -0.52
MINDY3-206ENST00000477891 PNMA5Q96PV4 448 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 ZMYND15Q9H091 742 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 THAP9Q9H5L6 903 aa11.8□□□□□ -0.52
MINDY3-206ENST00000477891 DNAJC18Q9H819 358 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms