RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GPRC5AQ8NFJ5 357 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 C8orf76Q96K31 380 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 SH3GLB2Q9NR46 395 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 MORF4L1Q9UBU8 362 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 CPA4Q9UI42 421 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 TRIM29Q14134 588 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 Q3C1V9 767 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 TKFCQ3LXA3 575 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 PPP1R18Q6NYC8 613 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 RIOX2Q8IUF8 465 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 CCDC148Q8NFR7 591 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 CCDC12Q8WUD4 166 aaPredicted RBP18.64■□□□□ 0.57
VHL-203ENST00000477538 SHISA4Q96DD7 197 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
VHL-203ENST00000477538 CWC22Q9HCG8 908 aaKnown RBP18.64■□□□□ 0.57
VHL-203ENST00000477538 HOMER2Q9NSB8 354 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 GJB4Q9NTQ9 266 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 RNF186Q9NXI6 227 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 MRPL11Q9Y3B7 192 aaKnown RBP18.64■□□□□ 0.57
VHL-203ENST00000477538 MCM3APO60318 1980 aa18.64■□□□□ 0.57
VHL-203ENST00000477538 TCHHQ07283 1943 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 TRPA1O75762 1119 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 SLC25A27O95847 323 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 BCRP11274 1271 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 PDCP20941 246 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 CCNA1P78396 465 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 LARP1BQ659C4 914 aaKnown RBP18.63■□□□□ 0.57
VHL-203ENST00000477538 C17orf99Q6UX52 265 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 FAM177A1Q8N128 213 aaPredicted RBP18.63■□□□□ 0.57
VHL-203ENST00000477538 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 RIPK3Q9Y572 518 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 ZNF236Q9UL36 1845 aa18.63■□□□□ 0.57
VHL-203ENST00000477538 COPB2P35606 906 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 NLRP5P59047 1200 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 MUM1L1Q5H9M0 696 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 KRT40Q6A162 431 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 NCAPG2Q86XI2 1143 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 PHF20Q9BVI0 1012 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 KCNJ14Q9UNX9 436 aa18.62■□□□□ 0.57
VHL-203ENST00000477538 ESYT2A0FGR8 921 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 SMCO2A6NFE2 343 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 TBC1D8O95759 1140 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 ERCC3P19447 782 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 ADCY7P51828 1080 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 GUCY1B3Q02153 619 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 MAP2K1Q02750 393 aaPredicted RBP18.61■□□□□ 0.57
VHL-203ENST00000477538 SHCBP1Q8NEM2 672 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 CHST13Q8NET6 341 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 FBXO18Q8NFZ0 1043 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 ZMYND12Q9H0C1 365 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 R3HDMLQ9H3Y0 253 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 ACAD9Q9H845 621 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 KIAA1217Q5T5P2 1943 aa18.61■□□□□ 0.57
VHL-203ENST00000477538 H3BQV1 296 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 NFIBO00712 420 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 OPLAHO14841 1288 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 SYT1P21579 422 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 CALML3P27482 149 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
VHL-203ENST00000477538 CLEC4DQ8WXI8 215 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 PORCNQ9H237 461 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 MROH8Q9H579 483 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 PSTPIP2Q9H939 334 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 EFCC1Q9HA90 598 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 C6orf50Q9HD87 102 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 RIC8AQ9NPQ8 531 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 SAGE1Q9NXZ1 904 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 FBXO40Q9UH90 709 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 CASP8AP2Q9UKL3 1982 aa18.6■□□□□ 0.57
VHL-203ENST00000477538 MMP1P03956 469 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 GNA11P29992 359 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 WDR78Q5VTH9 848 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 GALNT17Q6IS24 598 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 MCF2L2Q86YR7 1114 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 RGS22Q8NE09 1264 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 CUL5Q93034 780 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 BEGAINQ9BUH8 593 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 GLT8D2Q9H1C3 349 aa18.59■□□□□ 0.57
VHL-203ENST00000477538 VPS37CA5D8V6 355 aaPredicted RBP18.58■□□□□ 0.56
VHL-203ENST00000477538 STX6O43752 255 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 CFBP00751 764 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 MRPL12P52815 198 aaKnown RBP18.58■□□□□ 0.56
VHL-203ENST00000477538 NPY5RQ15761 445 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 NSMFQ6X4W1 530 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 DAGLBQ8NCG7 672 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 BICD2Q8TD16 824 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 PCDHA4Q9UN74 947 aa18.58■□□□□ 0.56
VHL-203ENST00000477538 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
VHL-203ENST00000477538 MAPK4P31152 587 aa18.57■□□□□ 0.56
VHL-203ENST00000477538 KRT2P35908 639 aa18.57■□□□□ 0.56
VHL-203ENST00000477538 SAFBQ15424 915 aaKnown RBP eCLIP18.57■□□□□ 0.56
VHL-203ENST00000477538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.57■□□□□ 0.56
VHL-203ENST00000477538 BLIDQ8IZY5 108 aa18.57■□□□□ 0.56
VHL-203ENST00000477538 SAMD3Q8N6K7 520 aa18.57■□□□□ 0.56
VHL-203ENST00000477538 TBC1D5Q92609 795 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms