RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PFASO15067 1338 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 ABCB11O95342 1321 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 PNMA6FA0A0J9YX94 578 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 ADCY3O60266 1144 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 RXRAP19793 462 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 GRK4P32298 578 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 METAP2P50579 478 aaKnown RBP eCLIP15.22■□□□□ 0.03
TOP3A-205ENST00000477508 TOB2Q14106 344 aaPredicted RBP15.22■□□□□ 0.03
TOP3A-205ENST00000477508 QRICH1Q2TAL8 776 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 TMTC3Q6ZXV5 915 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 CCDC144CPQ8IYA2 1237 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 ANKRD35Q8N283 1001 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
TOP3A-205ENST00000477508 DIS3Q9Y2L1 958 aaKnown RBP15.22■□□□□ 0.03
TOP3A-205ENST00000477508 NID2Q14112 1375 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 ZNF236Q9UL36 1845 aa15.22■□□□□ 0.03
TOP3A-205ENST00000477508 CYTH3O43739 400 aa15.21■□□□□ 0.03
TOP3A-205ENST00000477508 CYP2B6P20813 491 aa15.21■□□□□ 0.03
TOP3A-205ENST00000477508 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
TOP3A-205ENST00000477508 NEK4P51957 841 aa15.21■□□□□ 0.03
TOP3A-205ENST00000477508 SRBD1Q8N5C6 995 aaKnown RBP15.21■□□□□ 0.03
TOP3A-205ENST00000477508 RGS22Q8NE09 1264 aa15.21■□□□□ 0.03
TOP3A-205ENST00000477508 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
TOP3A-205ENST00000477508 HPS5Q9UPZ3 1129 aa15.21■□□□□ 0.03
TOP3A-205ENST00000477508 MRPL11Q9Y3B7 192 aaKnown RBP15.21■□□□□ 0.03
TOP3A-205ENST00000477508 MYH6P13533 1939 aa15.21■□□□□ 0.02
TOP3A-205ENST00000477508 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.02
TOP3A-205ENST00000477508 ZNFX1Q9P2E3 1918 aaKnown RBP15.2■□□□□ 0.02
TOP3A-205ENST00000477508 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 UBXN2AP68543 259 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 MCF2L2Q86YR7 1114 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 SAMD3Q8N6K7 520 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 ARMC5Q96C12 935 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 PIGSQ96S52 555 aa15.2■□□□□ 0.02
TOP3A-205ENST00000477508 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
TOP3A-205ENST00000477508 DNAJC25-GNG10A0A024R161 153 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 ABCB7O75027 752 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 HMGCRP04035 888 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 RABEP1Q15276 862 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 USH1GQ495M9 461 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 CPLX2Q6PUV4 134 aaKnown RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 ZNF467Q7Z7K2 595 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 RAB11FIP4Q86YS3 637 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 MSL3Q8N5Y2 521 aaKnown RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 TBC1D32Q96NH3 1257 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 MAP3K20Q9NYL2 800 aaKnown RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-205ENST00000477508 PCDHA1Q9Y5I3 950 aa15.19■□□□□ 0.02
TOP3A-205ENST00000477508 POTEB2H3BUK9 544 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 COBLO75128 1261 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 ADD1P35611 737 aaKnown RBP15.18■□□□□ 0.02
TOP3A-205ENST00000477508 AK2P54819 239 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 CLEC4DQ8WXI8 215 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 ABHD8Q96I13 439 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
TOP3A-205ENST00000477508 LOC102724159A0A0B4J2E5 919 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 PGK2P07205 417 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 ELNP15502 786 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 CDC27P30260 824 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 AKAP17AQ02040 695 aaKnown RBP15.17■□□□□ 0.02
TOP3A-205ENST00000477508 FUT2Q10981 343 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 PWP2Q15269 919 aaKnown RBP15.17■□□□□ 0.02
TOP3A-205ENST00000477508 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 RNF207Q6ZRF8 634 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 TEX2Q8IWB9 1127 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 CMTR1Q8N1G2 835 aaKnown RBP15.17■□□□□ 0.02
TOP3A-205ENST00000477508 CCDC82Q8N4S0 544 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 NPLOC4Q8TAT6 608 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 ZNF333Q96JL9 665 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 KIF2CQ99661 725 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-205ENST00000477508 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
TOP3A-205ENST00000477508 HTTP42858 3142 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 SMCHD1A6NHR9 2005 aa15.17■□□□□ 0.02
TOP3A-205ENST00000477508 hCG_1984214I3L0E3 225 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 NFIBO00712 420 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 CPLX1O14810 134 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 ST18O60284 1047 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 PPP1R11O60927 126 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-205ENST00000477508 CDKL5O76039 1030 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 INHAP05111 366 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 IFNAR1P17181 557 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
TOP3A-205ENST00000477508 BAATQ14032 418 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-205ENST00000477508 ZNF713Q8N859 430 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-205ENST00000477508 FAM133AQ8N9E0 248 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 PIBF1Q8WXW3 757 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 TRIB2Q92519 343 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 MPHOSPH6Q99547 160 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 352 ms