RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 ZSCAN16Q9H4T2 348 aaPredicted RBP13.69□□□□□ -0.22
XPC-205ENST00000476581 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 TRIM29Q14134 588 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 LRRC8AQ8IWT6 810 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 NUP62CLQ9H1M0 184 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 PAPPA2Q9BXP8 1791 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 USP27XA6NNY8 438 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 KIF2AO00139 706 aaPredicted RBP13.68□□□□□ -0.22
XPC-205ENST00000476581 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
XPC-205ENST00000476581 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
XPC-205ENST00000476581 TPM4P67936 248 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 KRT85P78386 507 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 MTMR2Q13614 643 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
XPC-205ENST00000476581 NOSTRINQ8IVI9 506 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
XPC-205ENST00000476581 RRAGCQ9HB90 399 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 SCN4AP35499 1836 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 ASNSP08243 561 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 ANO6Q4KMQ2 910 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
XPC-205ENST00000476581 WASF1Q92558 559 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 CLMNQ96JQ2 1002 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 PCDHB6Q9Y5E3 794 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 TRIM75PA6NK02 468 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 CTNND1O60716 968 aaKnown RBP13.67□□□□□ -0.22
XPC-205ENST00000476581 CLCN6P51797 869 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 NLRP5P59047 1200 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 SPP2Q13103 211 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 SYT10Q6XYQ8 523 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
XPC-205ENST00000476581 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 M0R2N6 131 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 BMP3P12645 472 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 PTPRAP18433 802 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 GNAQP50148 359 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 NEK11Q8NG66 645 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
XPC-205ENST00000476581 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 WNK4Q96J92 1243 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 L2HGDHQ9H9P8 463 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 ARHGEF10LQ9HCE6 1279 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 EMILIN3Q9NT22 766 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 PITPNM2Q9BZ72 1349 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
XPC-205ENST00000476581 ZRANB2O95218 330 aaKnown RBP eCLIP13.66□□□□□ -0.22
XPC-205ENST00000476581 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
XPC-205ENST00000476581 GRIN1Q05586 938 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
XPC-205ENST00000476581 VGLL4Q14135 290 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 QRICH1Q2TAL8 776 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 RBM43Q6ZSC3 357 aaKnown RBP13.66□□□□□ -0.22
XPC-205ENST00000476581 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
XPC-205ENST00000476581 DCAF4Q8WV16 495 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 ZBTB9Q96C00 473 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 CDCA5Q96FF9 252 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 VCPKMTQ9H867 229 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 NMRK2Q9NPI5 230 aa13.66□□□□□ -0.22
XPC-205ENST00000476581 ELP1O95163 1332 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 MYO1CO00159 1063 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 CASQ1P31415 396 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 IKQ13123 557 aaPredicted RBP13.65□□□□□ -0.22
XPC-205ENST00000476581 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
XPC-205ENST00000476581 KRBA2Q6ZNG9 492 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 PIK3AP1Q6ZUJ8 805 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
XPC-205ENST00000476581 MTMR8Q96EF0 704 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 ZHX2Q9Y6X8 837 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 PEX10O60683 326 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 LIG1P18858 919 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 KRT2P35908 639 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 NAPAP54920 295 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 ERCC6LQ2NKX8 1250 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 USH1GQ495M9 461 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 GPATCH4Q5T3I0 446 aaKnown RBP13.65□□□□□ -0.22
XPC-205ENST00000476581 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 P2RX7Q99572 595 aaKnown RBP13.65□□□□□ -0.22
XPC-205ENST00000476581 PRR12Q9ULL5 1215 aa13.65□□□□□ -0.22
XPC-205ENST00000476581 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
XPC-205ENST00000476581 UBE2SQ16763 222 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 CCAR2Q8N163 923 aaKnown RBP13.64□□□□□ -0.23
XPC-205ENST00000476581 LINC00301Q8NCQ3 95 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
XPC-205ENST00000476581 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 SNCAIPQ9Y6H5 919 aa13.64□□□□□ -0.23
XPC-205ENST00000476581 SKILP12757 684 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms