RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 IQCF3P0C7M6 154 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 SMPD1P17405 629 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 CDK8P49336 464 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 ERVK-21P61565 698 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 CPXCR1Q8N123 301 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 FAM133AQ8N9E0 248 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 RETREG2Q8NC44 543 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 SDR42E1Q8WUS8 393 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 TGS1Q96RS0 853 aaKnown RBP17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 FTOQ9C0B1 505 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 SLC38A10Q9HBR0 1119 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 ATP8A2Q9NTI2 1148 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 POLR3EQ9NVU0 708 aa17.44■□□□□ 0.38
CSNK2B-207ENST00000475875 MYH8P13535 1937 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 C19orf67A6NJJ6 358 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 RAD21O60216 631 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 PDE6AP16499 860 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 PKN1Q16512 942 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 SPRED2Q7Z698 418 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 AMOTL1Q8IY63 956 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 TLR7Q9NYK1 1049 aaKnown RBP17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 TRIOO75962 3097 aa17.43■□□□□ 0.38
CSNK2B-207ENST00000475875 LCHNA4D1U4 455 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 USP17L12C9JPN9 530 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 USP17L21D6R901 530 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 FDX1P10109 184 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 ZP2Q05996 745 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 BFSP2Q13515 415 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 C12orf60Q5U649 245 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 SSH3Q8TE77 659 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 CCDC8Q9H0W5 538 aaPredicted RBP17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
CSNK2B-207ENST00000475875 SLC4A3P48751 1232 aa17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 CNTN2Q02246 1040 aa17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 RAD9AQ99638 391 aa17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 ZBED2Q9BTP6 218 aa17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
CSNK2B-207ENST00000475875 SCN5AQ14524 2016 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 F5H6K3 240 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 PURAQ00577 322 aaKnown RBP17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 KLRC3Q07444 240 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 TAPT1Q6NXT6 567 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 NFRKBQ6P4R8 1299 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 BMP8AQ7Z5Y6 402 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 ADHFE1Q8IWW8 467 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 LCORLQ8N3X6 602 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 PHOX2BQ99453 314 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 ACAD9Q9H845 621 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 VTA1Q9NP79 307 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 NYAP2Q9P242 653 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
CSNK2B-207ENST00000475875 TANC1Q9C0D5 1861 aa17.39■□□□□ 0.38
CSNK2B-207ENST00000475875 TCRBV5S4A2TA0A5A2 114 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 SOWAHBA6NEL2 793 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 GJB5O95377 273 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 PARNO95453 639 aaKnown RBP17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 NDUFB10O96000 172 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 CPT1AP50416 773 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 PRSS33Q8NF86 280 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 MTG1Q9BT17 334 aaPredicted RBP17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
CSNK2B-207ENST00000475875 LINC01553A4QN01 128 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 EFCAB14O75071 495 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 COL19A1Q14993 1142 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 PTPROQ16827 1216 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 TKFCQ3LXA3 575 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 DUSP28Q4G0W2 176 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 TIGD5Q53EQ6 642 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 HERC4Q5GLZ8 1057 aaPredicted RBP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 TRMT2AQ8IZ69 625 aaKnown RBP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 PABPC5Q96DU9 382 aaKnown RBP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 MRPL38Q96DV4 380 aaKnown RBP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 POP1Q99575 1024 aaKnown RBP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
CSNK2B-207ENST00000475875 CACNA1HO95180 2353 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 C5orf42Q9H799 3197 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 CCDC155Q8N6L0 562 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 MORC4Q8TE76 937 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 AFAP1L1Q8TED9 768 aa17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 GPHNQ9NQX3 736 aaPredicted RBP17.37■□□□□ 0.37
CSNK2B-207ENST00000475875 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms