RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PGK1P00558 417 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 STAT3P40763 770 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 EPHB4P54760 987 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 MMP19Q99542 508 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
CALD1-217ENST00000475772 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 TTYH1Q9H313 450 aaPredicted RBP12.54□□□□□ -0.4
CALD1-217ENST00000475772 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
CALD1-217ENST00000475772 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 PRKAG2Q9UGJ0 569 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 RIPK3Q9Y572 518 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 MYH4Q9Y623 1939 aa12.54□□□□□ -0.4
CALD1-217ENST00000475772 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
CALD1-217ENST00000475772 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
CALD1-217ENST00000475772 HMMRO75330 724 aa12.53□□□□□ -0.4
CALD1-217ENST00000475772 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
CALD1-217ENST00000475772 RASA1P20936 1047 aa12.53□□□□□ -0.4
CALD1-217ENST00000475772 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
CALD1-217ENST00000475772 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
CALD1-217ENST00000475772 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
CALD1-217ENST00000475772 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
CALD1-217ENST00000475772 SH2D4AQ9H788 454 aa12.53□□□□□ -0.4
CALD1-217ENST00000475772 KDM4AO75164 1064 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
CALD1-217ENST00000475772 BLOC1S3Q6QNY0 202 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 KLHDC9Q8NEP7 349 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 OSBP2Q969R2 916 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
CALD1-217ENST00000475772 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.41
CALD1-217ENST00000475772 IL21Q9HBE4 155 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 XPNPEP3Q9NQH7 507 aa12.52□□□□□ -0.41
CALD1-217ENST00000475772 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 IGKV6D-41A0A0C4DH26 115 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
CALD1-217ENST00000475772 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 F5H6K3 240 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 KIAA0355O15063 1070 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 RARBP10826 455 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 COPS2P61201 443 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 SMAD3P84022 425 aaKnown RBP12.51□□□□□ -0.41
CALD1-217ENST00000475772 KCNC4Q03721 635 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 KLRC3Q07444 240 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
CALD1-217ENST00000475772 C20orf194Q5TEA3 1177 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 STK11IPQ8N1F8 1099 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 FGD4Q96M96 766 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 TACC3Q9Y6A5 838 aa12.51□□□□□ -0.41
CALD1-217ENST00000475772 MYADML2A6NDP7 307 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 ADCY6O43306 1168 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 CLTBP09497 229 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 AKR1A1P14550 325 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 FAAP100Q0VG06 881 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 KCTD2Q14681 263 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 MAMDC4Q6UXC1 1216 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 RNF180Q86T96 592 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 MYLIPQ8WY64 445 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 ZNF516Q92618 1163 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 ROBO3Q96MS0 1386 aa12.5□□□□□ -0.41
CALD1-217ENST00000475772 ATP2A1O14983 1001 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 RAD21O60216 631 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 NDUFB10O96000 172 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 ANKRD33Q7Z3H0 272 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 MKL1Q969V6 931 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 TOX2Q96NM4 488 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 TSEN34Q9BSV6 310 aaKnown RBP12.49□□□□□ -0.41
CALD1-217ENST00000475772 LRRCC1Q9C099 1032 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 EPB41L4AQ9HCS5 686 aaPredicted RBP12.49□□□□□ -0.41
CALD1-217ENST00000475772 ARPP21Q9UBL0 812 aaPredicted RBP12.49□□□□□ -0.41
CALD1-217ENST00000475772 CLIP2Q9UDT6 1046 aa12.49□□□□□ -0.41
CALD1-217ENST00000475772 TTC28Q96AY4 2481 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 MUC3AQ02505 3323 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 PQBP1O60828 265 aaKnown RBP12.48□□□□□ -0.41
CALD1-217ENST00000475772 CDK7P50613 346 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 ACLYP53396 1101 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 KCNA10Q16322 511 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
CALD1-217ENST00000475772 ZSCAN25Q6NSZ9 544 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 C16orf59Q7L2K0 433 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 MSL3Q8N5Y2 521 aaKnown RBP12.48□□□□□ -0.41
CALD1-217ENST00000475772 KBTBD3Q8NAB2 608 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
CALD1-217ENST00000475772 TEX13BQ9BXU2 312 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
CALD1-217ENST00000475772 TMEM39AQ9NV64 488 aa12.48□□□□□ -0.41
CALD1-217ENST00000475772 SYNGAP1Q96PV0 1343 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 CTAGE5O15320 804 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms