RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
FAM3A-218ENST00000475657 IQSEC1Q6DN90 963 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
FAM3A-218ENST00000475657 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
FAM3A-218ENST00000475657 BCL11AQ9H165 835 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 ARMT1Q9H993 441 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 RAVER2Q9HCJ3 691 aaKnown RBP16.72■□□□□ 0.27
FAM3A-218ENST00000475657 NYAP2Q9P242 653 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 CTDP1Q9Y5B0 961 aaPredicted RBP16.72■□□□□ 0.27
FAM3A-218ENST00000475657 MYH8P13535 1937 aa16.72■□□□□ 0.27
FAM3A-218ENST00000475657 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.71■□□□□ 0.27
FAM3A-218ENST00000475657 PRKAB2O43741 272 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 ARHGEF15O94989 841 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 NDUFB10O96000 172 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 FDX1P10109 184 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 SMPD1P17405 629 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 SLC4A3P48751 1232 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 NHLH1Q02575 133 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 AACSQ86V21 672 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 DDRGK1Q96HY6 314 aa16.71■□□□□ 0.27
FAM3A-218ENST00000475657 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 PSMC6P62333 389 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 CNTN2Q02246 1040 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 LEXMQ3ZCV2 418 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 FEM1BQ9UK73 627 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 SYNPO2Q9UMS6 1093 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 TNKSO95271 1327 aa16.7■□□□□ 0.26
FAM3A-218ENST00000475657 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 BAIAP3O94812 1187 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 MBD4O95243 580 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 CYP2C9P11712 490 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 UBE2ZQ9H832 354 aaPredicted RBP16.69■□□□□ 0.26
FAM3A-218ENST00000475657 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 TRMT13Q9NUP7 481 aaKnown RBP16.69■□□□□ 0.26
FAM3A-218ENST00000475657 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
FAM3A-218ENST00000475657 SOWAHBA6NEL2 793 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 GOLIM4O00461 696 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 ADD2P35612 726 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 CSPP1Q1MSJ5 1256 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 MKL1Q969V6 931 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 A1CFQ9NQ94 594 aaKnown RBP16.68■□□□□ 0.26
FAM3A-218ENST00000475657 POLR3EQ9NVU0 708 aa16.68■□□□□ 0.26
FAM3A-218ENST00000475657 IQCF3P0C7M6 154 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 CTR9Q6PD62 1173 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
FAM3A-218ENST00000475657 RETREG2Q8NC44 543 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 FBXL18Q96ME1 805 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 UIMC1Q96RL1 719 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
FAM3A-218ENST00000475657 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 TKFCQ3LXA3 575 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 PUS10Q3MIT2 529 aaKnown RBP16.66■□□□□ 0.26
FAM3A-218ENST00000475657 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
FAM3A-218ENST00000475657 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 IL1RAPL2Q9NP60 686 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 VTA1Q9NP79 307 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 PDGFCQ9NRA1 345 aa16.66■□□□□ 0.26
FAM3A-218ENST00000475657 ARPP21Q9UBL0 812 aaPredicted RBP16.66■□□□□ 0.26
FAM3A-218ENST00000475657 GREB1LQ9C091 1923 aaPredicted RBP16.65■□□□□ 0.26
FAM3A-218ENST00000475657 RASA1P20936 1047 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 PTGS1P23219 599 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
FAM3A-218ENST00000475657 RRP1P56182 461 aaKnown RBP16.65■□□□□ 0.26
FAM3A-218ENST00000475657 PURAQ00577 322 aaKnown RBP16.65■□□□□ 0.26
FAM3A-218ENST00000475657 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
FAM3A-218ENST00000475657 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
FAM3A-218ENST00000475657 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.268e-8■■■■□ 25
FAM3A-218ENST00000475657 HOMER2Q9NSB8 354 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 CLIP2Q9UDT6 1046 aa16.65■□□□□ 0.26
FAM3A-218ENST00000475657 BAZ2AQ9UIF9 1905 aaKnown RBP16.64■□□□□ 0.26
FAM3A-218ENST00000475657 IGKV6D-41A0A0C4DH26 115 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 GRXCR2A6NFK2 248 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 DCXO43602 365 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 KCNJ6P48051 423 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 CPT1AP50416 773 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 ERVK-21P61565 698 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
FAM3A-218ENST00000475657 BFSP2Q13515 415 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
FAM3A-218ENST00000475657 SBK1Q52WX2 424 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 SPRED2Q7Z698 418 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 MTG1Q9BT17 334 aaPredicted RBP16.64■□□□□ 0.25
FAM3A-218ENST00000475657 SUGCTQ9HAC7 445 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
FAM3A-218ENST00000475657 ZNF318Q5VUA4 2279 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms