RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 PP2D1A8MPX8 630 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 MPHOSPH10O00566 681 aaKnown RBP11.08□□□□□ -0.64
USP39-214ENST00000474572 RHOBTB3O94955 611 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 SFPQP23246 707 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP39-214ENST00000474572 PBX1P40424 430 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 UBA7P41226 1012 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 MMP14P50281 582 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 RBM5P52756 815 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP39-214ENST00000474572 TCP10Q12799 353 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 NR1I3Q14994 352 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 FKBP1CQ5VVH2 108 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 CABP7Q86V35 215 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 NAP1L4Q99733 375 aaKnown RBP11.08□□□□□ -0.64
USP39-214ENST00000474572 MMTAG2Q9BU76 263 aaKnown RBP11.08□□□□□ -0.64
USP39-214ENST00000474572 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
USP39-214ENST00000474572 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
USP39-214ENST00000474572 RWDD2AQ9UIY3 292 aa11.08□□□□□ -0.64
USP39-214ENST00000474572 CNTNAP1P78357 1384 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 UQCRHLA0A096LP55 91 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 UQCRHP07919 91 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 GCFC2P16383 781 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 CDC25AP30304 524 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 HOXA7P31268 230 aaPredicted RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 MRPL12P52815 198 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 ICA1Q05084 483 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 SEPT2Q15019 361 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 SHROOM1Q2M3G4 852 aaPredicted RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 QRICH1Q2TAL8 776 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 MCTP2Q6DN12 878 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 MOXD1Q6UVY6 613 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 KCTD1Q719H9 257 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 POTEDQ86YR6 584 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 CCAR2Q8N163 923 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 STAMQ92783 540 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 CUL5Q93034 780 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 ZBED3Q96IU2 234 aaPredicted RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 MBOAT7Q96N66 472 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 C7orf25Q9BPX7 421 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 GTPBP4Q9BZE4 634 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 BLZF1Q9H2G9 400 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 STK17AQ9UEE5 414 aa11.07□□□□□ -0.64
USP39-214ENST00000474572 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 LIMA1Q9UHB6 759 aaKnown RBP11.07□□□□□ -0.64
USP39-214ENST00000474572 LRRC10BA6NIK2 292 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 F5H6K3 240 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 PSMD14O00487 310 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 DYNC1I1O14576 645 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 SLC26A4O43511 780 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 SLC37A4O43826 429 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 TDP2O95551 362 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 PLCG1P19174 1290 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 SLC16A2P36021 539 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 PPP1R2P41236 205 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 JAG1P78504 1218 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 KLRC3Q07444 240 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 SPAG1Q07617 926 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 PAK1Q13153 545 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 PDIA5Q14554 519 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
USP39-214ENST00000474572 CALCRLQ16602 461 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 E4F1Q66K89 784 aaPredicted RBP11.06□□□□□ -0.64
USP39-214ENST00000474572 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 TMEM139Q8IV31 216 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 SMYD4Q8IYR2 804 aaPredicted RBP11.06□□□□□ -0.64
USP39-214ENST00000474572 ADSSL1Q8N142 457 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 GIMAP8Q8ND71 665 aaPredicted RBP11.06□□□□□ -0.64
USP39-214ENST00000474572 CRYGNQ8WXF5 182 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 TRIM9Q9C026 710 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 ITIH6Q6UXX5 1313 aa11.06□□□□□ -0.64
USP39-214ENST00000474572 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 USP27XA6NNY8 438 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 NRDCO43847 1150 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 TBC1D12O60347 775 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 GDF11O95390 407 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 NDUFB10O96000 172 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 DPEP1P16444 411 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 CYP3A7P24462 503 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 SLC1A4P43007 532 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 MAP3K10Q02779 954 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms