RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 YEATS4O95619 227 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 NASPP49321 788 aaPredicted RBP23.33■■□□□ 1.32
CDHR3-210ENST00000474330 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.32
CDHR3-210ENST00000474330 HMGCS2P54868 508 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 CEBPZQ03701 1054 aaKnown RBP23.33■■□□□ 1.32
CDHR3-210ENST00000474330 TRAF1Q13077 416 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 ANO1Q5XXA6 986 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 BICD2Q8TD16 824 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 MS4A4AQ96JQ5 239 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 RPAP3Q9H6T3 665 aaPredicted RBP23.33■■□□□ 1.32
CDHR3-210ENST00000474330 PCDHA6Q9UN73 950 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 PCDHA8Q9Y5H6 950 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 PCDHA1Q9Y5I3 950 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 CLIC4Q9Y696 253 aa23.33■■□□□ 1.32
CDHR3-210ENST00000474330 IRF6O14896 467 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 INHBEP58166 350 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 SNAP25P60880 206 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 EARS2Q5JPH6 523 aaKnown RBP23.32■■□□□ 1.32
CDHR3-210ENST00000474330 TNS4Q8IZW8 715 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 PTPN18Q99952 460 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 SLF1Q9BQI6 1058 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 TMOD4Q9NZQ9 345 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 PARP14Q460N5 1801 aa23.32■■□□□ 1.32
CDHR3-210ENST00000474330 TESPA1A2RU30 521 aaPredicted RBP23.31■■□□□ 1.32
CDHR3-210ENST00000474330 IGF2BP3O00425 579 aaKnown RBP eCLIP23.31■■□□□ 1.32
CDHR3-210ENST00000474330 TBC1D8O95759 1140 aa23.31■■□□□ 1.32
CDHR3-210ENST00000474330 ADCY7P51828 1080 aa23.31■■□□□ 1.32
CDHR3-210ENST00000474330 IFNL1Q8IU54 200 aa23.31■■□□□ 1.32
CDHR3-210ENST00000474330 LINC00301Q8NCQ3 95 aa23.31■■□□□ 1.32
CDHR3-210ENST00000474330 TANGO6Q9C0B7 1094 aa23.31■■□□□ 1.32
CDHR3-210ENST00000474330 RIC8AQ9NPQ8 531 aa23.31■■□□□ 1.32
CDHR3-210ENST00000474330 GADD45BO75293 160 aaPredicted RBP23.3■■□□□ 1.32
CDHR3-210ENST00000474330 UBE2HP62256 183 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 PIK3AP1Q6ZUJ8 805 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 GLT8D2Q9H1C3 349 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 R3HDMLQ9H3Y0 253 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 NOL7Q9UMY1 257 aaKnown RBP23.3■■□□□ 1.32
CDHR3-210ENST00000474330 FAM205CA6NFA0 338 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 CXCL11O14625 94 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 TRAPPC10P48553 1259 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 MRPL12P52815 198 aaKnown RBP23.3■■□□□ 1.32
CDHR3-210ENST00000474330 SF3A1Q15459 793 aaKnown RBP23.3■■□□□ 1.32
CDHR3-210ENST00000474330 NOM1Q5C9Z4 860 aaKnown RBP23.3■■□□□ 1.32
CDHR3-210ENST00000474330 RASGRP4Q8TDF6 673 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 KCNH4Q9UQ05 1017 aa23.3■■□□□ 1.32
CDHR3-210ENST00000474330 DDX49Q9Y6V7 483 aaKnown RBP23.3■■□□□ 1.32
CDHR3-210ENST00000474330 FLOT1O75955 427 aa23.29■■□□□ 1.32
CDHR3-210ENST00000474330 STK38Q15208 465 aa23.29■■□□□ 1.32
CDHR3-210ENST00000474330 KRT25Q7Z3Z0 450 aa23.29■■□□□ 1.32
CDHR3-210ENST00000474330 CUL5Q93034 780 aa23.29■■□□□ 1.32
CDHR3-210ENST00000474330 RLFQ13129 1914 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 CCDC194A0A1B0GVG4 234 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 FDX1P10109 184 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 SLC39A14Q15043 492 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 PTPAQ15257 358 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 KLHL40Q2TBA0 621 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 REXO1Q8N1G1 1221 aaKnown RBP23.28■■□□□ 1.32
CDHR3-210ENST00000474330 KCNG4Q8TDN1 519 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 CFHR5Q9BXR6 569 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 PSTPIP2Q9H939 334 aa23.28■■□□□ 1.32
CDHR3-210ENST00000474330 SMCHD1A6NHR9 2005 aa23.27■■□□□ 1.32
CDHR3-210ENST00000474330 A0A0G2JLL6 359 aaPredicted RBP23.27■■□□□ 1.32
CDHR3-210ENST00000474330 MBD3O95983 291 aa23.27■■□□□ 1.32
CDHR3-210ENST00000474330 CLK2P49760 499 aaKnown RBP23.27■■□□□ 1.32
CDHR3-210ENST00000474330 USH1GQ495M9 461 aa23.27■■□□□ 1.32
CDHR3-210ENST00000474330 PRRT2Q7Z6L0 340 aaPredicted RBP23.27■■□□□ 1.32
CDHR3-210ENST00000474330 GPT2Q8TD30 523 aa23.27■■□□□ 1.32
CDHR3-210ENST00000474330 SPTLC2O15270 562 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 CCDC174Q6PII3 467 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 CATSPERGQ6ZRH7 1159 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 BRI3BPQ8WY22 251 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 PGBD1Q96JS3 809 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 SLC38A10Q9HBR0 1119 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.26■■□□□ 1.31
CDHR3-210ENST00000474330 BIN2Q9UBW5 565 aaPredicted RBP23.26■■□□□ 1.31
CDHR3-210ENST00000474330 PCDHB6Q9Y5E3 794 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L15C9J2P7 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L13C9JLJ4 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L11C9JVI0 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L18D6R9N7 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L22D6RA61 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L17D6RBQ6 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L19D6RCP7 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L20D6RJB6 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L24Q0WX57 530 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
CDHR3-210ENST00000474330 TEX2Q8IWB9 1127 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 PROCA1Q8NCQ7 364 aaPredicted RBP23.26■■□□□ 1.31
CDHR3-210ENST00000474330 CEP131Q9UPN4 1083 aa23.26■■□□□ 1.31
CDHR3-210ENST00000474330 PPP6R2O75170 966 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 ICAM1P05362 532 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 GTF2A2P52657 109 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 COG2Q14746 738 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 NONOQ15233 471 aaKnown RBP eCLIP23.25■■□□□ 1.31
CDHR3-210ENST00000474330 TTC38Q5R3I4 469 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 PNMA2Q9UL42 364 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 ADAMTS5Q9UNA0 930 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 MORC2Q9Y6X9 1032 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms