RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 RUFY2Q8WXA3 655 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 ANKS1AQ92625 1134 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 KRT23Q9C075 422 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 KAT14Q9H8E8 782 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 LAMA3Q16787 3333 aa23.33■■□□□ 1.33
TMEM54-204ENST00000474144 NT5C2P49902 561 aa23.33■■□□□ 1.33
TMEM54-204ENST00000474144 SNX17Q15036 470 aa23.33■■□□□ 1.33
TMEM54-204ENST00000474144 CCDC178Q5BJE1 867 aa23.33■■□□□ 1.33
TMEM54-204ENST00000474144 CYB5R4Q7L1T6 521 aa23.33■■□□□ 1.33
TMEM54-204ENST00000474144 SKAP1Q86WV1 359 aa23.33■■□□□ 1.33
TMEM54-204ENST00000474144 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.32■■□□□ 1.32
TMEM54-204ENST00000474144 A0A1W2PPC1 479 aa23.32■■□□□ 1.32
TMEM54-204ENST00000474144 SOX1O00570 391 aaPredicted RBP23.32■■□□□ 1.32
TMEM54-204ENST00000474144 DUSP11O75319 330 aaKnown RBP23.32■■□□□ 1.32
TMEM54-204ENST00000474144 CYP21A2P08686 494 aa23.32■■□□□ 1.32
TMEM54-204ENST00000474144 BAATQ14032 418 aaPredicted RBP23.32■■□□□ 1.32
TMEM54-204ENST00000474144 KLHDC9Q8NEP7 349 aa23.32■■□□□ 1.32
TMEM54-204ENST00000474144 CLEC4DQ8WXI8 215 aa23.32■■□□□ 1.32
TMEM54-204ENST00000474144 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
TMEM54-204ENST00000474144 TAF6LQ9Y6J9 622 aa23.32■■□□□ 1.32
TMEM54-204ENST00000474144 LRRC37A2A6NM11 1700 aa23.31■■□□□ 1.32
TMEM54-204ENST00000474144 A0A1W2PQ45 241 aaPredicted RBP23.31■■□□□ 1.32
TMEM54-204ENST00000474144 A0A1W2PQY0 241 aa23.31■■□□□ 1.32
TMEM54-204ENST00000474144 ASB14A6NK59 587 aa23.31■■□□□ 1.32
TMEM54-204ENST00000474144 SGSM2O43147 1006 aa23.31■■□□□ 1.32
TMEM54-204ENST00000474144 PTGS1P23219 599 aa23.31■■□□□ 1.32
TMEM54-204ENST00000474144 GPATCH4Q5T3I0 446 aaKnown RBP23.31■■□□□ 1.32
TMEM54-204ENST00000474144 CCSAPQ6IQ19 270 aaPredicted RBP23.31■■□□□ 1.32
TMEM54-204ENST00000474144 UBE2OQ9C0C9 1292 aaKnown RBP23.31■■□□□ 1.32
TMEM54-204ENST00000474144 ACLYP53396 1101 aa23.3■■□□□ 1.32
TMEM54-204ENST00000474144 KCNA10Q16322 511 aa23.3■■□□□ 1.32
TMEM54-204ENST00000474144 SLC30A10Q6XR72 485 aa23.3■■□□□ 1.32
TMEM54-204ENST00000474144 EEPD1Q7L9B9 569 aa23.3■■□□□ 1.32
TMEM54-204ENST00000474144 UBAC1Q9BSL1 405 aa23.3■■□□□ 1.32
TMEM54-204ENST00000474144 LTBP2Q14767 1821 aa23.29■■□□□ 1.32
TMEM54-204ENST00000474144 PTPDC1A2A3K4 754 aa23.29■■□□□ 1.32
TMEM54-204ENST00000474144 C6orf222P0C671 652 aaPredicted RBP23.29■■□□□ 1.32
TMEM54-204ENST00000474144 SEC23AQ15436 765 aa23.29■■□□□ 1.32
TMEM54-204ENST00000474144 C1orf53Q5VUE5 145 aa23.29■■□□□ 1.32
TMEM54-204ENST00000474144 SH3RF1Q7Z6J0 888 aa23.29■■□□□ 1.32
TMEM54-204ENST00000474144 TSEN34Q9BSV6 310 aaKnown RBP23.29■■□□□ 1.32
TMEM54-204ENST00000474144 PRDM5Q9NQX1 630 aaPredicted RBP23.29■■□□□ 1.32
TMEM54-204ENST00000474144 PDGFCQ9NRA1 345 aa23.29■■□□□ 1.32
TMEM54-204ENST00000474144 GJA9P57773 515 aa23.28■■□□□ 1.32
TMEM54-204ENST00000474144 USH1GQ495M9 461 aa23.28■■□□□ 1.32
TMEM54-204ENST00000474144 TMEM63BQ5T3F8 832 aa23.28■■□□□ 1.32
TMEM54-204ENST00000474144 IFIT1BQ5T764 474 aaKnown RBP23.28■■□□□ 1.32
TMEM54-204ENST00000474144 FBXO16Q8IX29 292 aaPredicted RBP23.28■■□□□ 1.32
TMEM54-204ENST00000474144 ADGRF4Q8IZF3 695 aa23.28■■□□□ 1.32
TMEM54-204ENST00000474144 LRCH3Q96II8 777 aa23.28■■□□□ 1.32
TMEM54-204ENST00000474144 UPF3AQ9H1J1 476 aaKnown RBP23.28■■□□□ 1.32
TMEM54-204ENST00000474144 WDR19Q8NEZ3 1342 aa23.28■■□□□ 1.32
TMEM54-204ENST00000474144 CTAGE5O15320 804 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 CALML3P27482 149 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 ALDH5A1P51649 535 aaPredicted RBP23.27■■□□□ 1.32
TMEM54-204ENST00000474144 TNFAIP2Q03169 654 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 TLE2Q04725 743 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 CDC37Q16543 378 aaPredicted RBP23.27■■□□□ 1.32
TMEM54-204ENST00000474144 TAPT1Q6NXT6 567 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 RNF207Q6ZRF8 634 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 STOX1Q6ZVD7 989 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 TDHQ8IZJ6 230 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 PDLIM7Q9NR12 457 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 PRKAG2Q9UGJ0 569 aa23.27■■□□□ 1.32
TMEM54-204ENST00000474144 U3KPZ7 1027 aaPredicted RBP23.27■■□□□ 1.32
TMEM54-204ENST00000474144 TRIM43BA6NCK2 446 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 MOXD2PA6NHM9 499 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 PARP1P09874 1014 aaKnown RBP23.26■■□□□ 1.31
TMEM54-204ENST00000474144 SMPD1P17405 629 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 CST5P28325 142 aaPredicted RBP23.26■■□□□ 1.31
TMEM54-204ENST00000474144 ASPRV1Q53RT3 343 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 NOL8Q76FK4 1167 aaKnown RBP23.26■■□□□ 1.31
TMEM54-204ENST00000474144 STAG2Q8N3U4 1231 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
TMEM54-204ENST00000474144 LBHD1Q9BQE6 289 aaPredicted RBP23.26■■□□□ 1.31
TMEM54-204ENST00000474144 SENP2Q9HC62 589 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 STARD7Q9NQZ5 370 aa23.26■■□□□ 1.31
TMEM54-204ENST00000474144 GNEQ9Y223 722 aaKnown RBP23.26■■□□□ 1.31
TMEM54-204ENST00000474144 E7EWF7 191 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 ASGR1P07306 291 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 RPS6P62753 249 aaKnown RBP23.25■■□□□ 1.31
TMEM54-204ENST00000474144 BEX3Q00994 111 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 TRDNQ13061 729 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 CHST3Q7LGC8 479 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 MAP4K1Q92918 833 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 VAT1LQ9HCJ6 419 aa23.25■■□□□ 1.31
TMEM54-204ENST00000474144 PQBP1O60828 265 aaKnown RBP23.24■■□□□ 1.31
TMEM54-204ENST00000474144 GNASQ5JWF2 1037 aa23.24■■□□□ 1.31
TMEM54-204ENST00000474144 NUP133Q8WUM0 1156 aa23.24■■□□□ 1.31
TMEM54-204ENST00000474144 TBC1D5Q92609 795 aa23.24■■□□□ 1.31
TMEM54-204ENST00000474144 JMJD4Q9H9V9 463 aa23.24■■□□□ 1.31
TMEM54-204ENST00000474144 SPC25Q9HBM1 224 aa23.24■■□□□ 1.31
TMEM54-204ENST00000474144 ADD3Q9UEY8 706 aaKnown RBP23.24■■□□□ 1.31
TMEM54-204ENST00000474144 PNMA2Q9UL42 364 aa23.24■■□□□ 1.31
TMEM54-204ENST00000474144 RBM8AQ9Y5S9 174 aaKnown RBP23.24■■□□□ 1.31
TMEM54-204ENST00000474144 DHX16O60231 1041 aaKnown RBP23.23■■□□□ 1.31
TMEM54-204ENST00000474144 ITGB8P26012 769 aa23.23■■□□□ 1.31
TMEM54-204ENST00000474144 QRICH1Q2TAL8 776 aa23.23■■□□□ 1.31
TMEM54-204ENST00000474144 TLK2Q86UE8 772 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms