RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.15□□□□□ -1.26
FN1-219ENST00000474036 ARMCX6Q7L4S7 300 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 ANKRD24Q8TF21 1146 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 GIPC2Q8TF65 315 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 SYTL4Q96C24 671 aaPredicted RBP7.15□□□□□ -1.26
FN1-219ENST00000474036 SNX11Q9Y5W9 270 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 USP19O94966 1318 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 WDR17Q8IZU2 1322 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 BCL9O00512 1426 aa7.15□□□□□ -1.27
FN1-219ENST00000474036 ADGRB1O14514 1584 aa7.15□□□□□ -1.27
FN1-219ENST00000474036 CICQ96RK0 1608 aaPredicted RBP7.15□□□□□ -1.27
FN1-219ENST00000474036 KIAA1551Q9HCM1 1747 aa7.15□□□□□ -1.27
FN1-219ENST00000474036 ARFGEF1Q9Y6D6 1849 aa7.15□□□□□ -1.27
FN1-219ENST00000474036 UBR3Q6ZT12 1888 aa7.15□□□□□ -1.27
FN1-219ENST00000474036 ZNF503-AS2A6NEH8 195 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.14□□□□□ -1.27
FN1-219ENST00000474036 SLIT3O75094 1523 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 SLITRK5O94991 958 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 ZP2Q05996 745 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 IKZF1Q13422 519 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 MEI1Q5TIA1 1274 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 PPIP5K1Q6PFW1 1433 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 KCPQ6ZWJ8 1503 aa7.14□□□□□ -1.27
FN1-219ENST00000474036 C14orf93Q9H972 538 aaKnown RBP7.14□□□□□ -1.27
FN1-219ENST00000474036 KIF13BQ9NQT8 1826 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 TIAM2Q8IVF5 1701 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 TOGARAM1Q9Y4F4 1720 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 CPSF1Q10570 1443 aaKnown RBP7.13□□□□□ -1.27
FN1-219ENST00000474036 TONSLQ96HA7 1378 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 PITPNM2Q9BZ72 1349 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 FANCGO15287 622 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 HNRNPUQ00839 825 aaKnown RBP eCLIP7.13□□□□□ -1.27
FN1-219ENST00000474036 MESP2Q0VG99 397 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 SLBPQ14493 270 aaKnown RBP eCLIP7.13□□□□□ -1.27
FN1-219ENST00000474036 NKG7Q16617 165 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 FLAD1Q8NFF5 587 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 RIN3Q8TB24 985 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 TMEM40Q8WWA1 233 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 CEP44Q9C0F1 390 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 PICK1Q9NRD5 415 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 GTF2IRD1Q9UHL9 959 aa7.13□□□□□ -1.27
FN1-219ENST00000474036 TTF2Q9UNY4 1162 aaKnown RBP7.13□□□□□ -1.27
FN1-219ENST00000474036 FARP2O94887 1054 aaPredicted RBP7.12□□□□□ -1.27
FN1-219ENST00000474036 COL23A1Q86Y22 540 aaPredicted RBP7.12□□□□□ -1.27
FN1-219ENST00000474036 GAL3ST3Q96A11 431 aa7.12□□□□□ -1.27
FN1-219ENST00000474036 CTNND2Q9UQB3 1225 aa7.12□□□□□ -1.27
FN1-219ENST00000474036 ITGB4P16144 1822 aa7.12□□□□□ -1.27
FN1-219ENST00000474036 POLR3AO14802 1390 aaPredicted RBP7.11□□□□□ -1.27
FN1-219ENST00000474036 C4BP0C0L5 1744 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 PRAMEF27A3QJZ7 478 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 CYFIP1Q7L576 1253 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 ASB11Q8WXH4 323 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 PLPPR2Q96GM1 343 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 CDK19Q9BWU1 502 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 SEMA3GQ9NS98 782 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 CD2APQ9Y5K6 639 aa7.11□□□□□ -1.27
FN1-219ENST00000474036 SORBS3O60504 671 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 ZNF16P17020 682 aaPredicted RBP7.1□□□□□ -1.27
FN1-219ENST00000474036 SV2BQ7L1I2 683 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 CILP2Q8IUL8 1156 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 ELMO3Q96BJ8 720 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 LIN37Q96GY3 246 aaPredicted RBP7.1□□□□□ -1.27
FN1-219ENST00000474036 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
FN1-219ENST00000474036 CCNL1Q9UK58 526 aaPredicted RBP7.1□□□□□ -1.27
FN1-219ENST00000474036 SAMM50Q9Y512 469 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 PDE4DIPQ5VU43 2346 aa7.1□□□□□ -1.27
FN1-219ENST00000474036 CCDC7Q96M83 1385 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 VIRMAQ69YN4 1812 aaKnown RBP7.09□□□□□ -1.27
FN1-219ENST00000474036 LRIG2O94898 1065 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 LRRC14Q15048 493 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 CCDC85BQ15834 202 aaPredicted RBP7.09□□□□□ -1.27
FN1-219ENST00000474036 SPOCD1Q6ZMY3 1216 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 SMIM5Q71RC9 77 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 ZSWIM9Q86XI8 627 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 RGS22Q8NE09 1264 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 CARS2Q9HA77 564 aaKnown RBP7.09□□□□□ -1.27
FN1-219ENST00000474036 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
FN1-219ENST00000474036 FAM208AQ9UK61 1670 aaKnown RBP7.09□□□□□ -1.27
FN1-219ENST00000474036 CACNA1SQ13698 1873 aa7.09□□□□□ -1.28
FN1-219ENST00000474036 DBX1A6NMT0 343 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 GNAT3A8MTJ3 354 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 FSTL1Q12841 308 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 TAF1CQ15572 869 aaPredicted RBP7.08□□□□□ -1.28
FN1-219ENST00000474036 CDKAL1Q5VV42 579 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 CRELD1Q96HD1 420 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 MIPEPQ99797 713 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
FN1-219ENST00000474036 LRRC10BA6NIK2 292 aa7.07□□□□□ -1.28
FN1-219ENST00000474036 FOXN1O15353 648 aa7.07□□□□□ -1.28
FN1-219ENST00000474036 IL2RBP14784 551 aa7.07□□□□□ -1.28
FN1-219ENST00000474036 CLCN7P51798 805 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms